Pimephales promelas (fathead minnow): 120487995
Help
Entry
120487995 CDS
T08155
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprm04054
]
120487995
Pattern recognition receptors [BR:
pprm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120487995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Fip1
Motif
Other DBs
NCBI-GeneID:
120487995
NCBI-ProteinID:
XP_039540370
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MRLHNEREGEDTASERSSPSPGSSGVSVKSDQSMRKLPSGSSDATVTSDPSIRKRQRSES
PEPSGVSLKSNSSMRKPLHFSEEPLTSEPLLTIKTESVPQNRDPRRVKDQHKTSMKNKYE
RSYEGTKLQENETLLNRIYTQLYIIEGEREGVNEEHEILQMEKTARTQHSQDTPIHYNDI
FKASPEPGRQEKQQIKTVLTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFMFVLPFRELN
LIRDHQYSLHRLLLDFHPELQDLDSKMYEECKVVFIFDGLDESRITLMFSDAQEVSDVTE
TSSVGVLMSNLIKGDLLPSALIWITSRPAAANQIPSKYIHRLTEIQGFNEPQKEEYFRKR
ISDEHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDLSAEIPQTLTEMYIHF
LLIQINMRNQKYEERDPEKLLQSNREVIMKLAEVAFHQLKKGNVMFYEEDLIESGIDVTD
ASVYSGICTEIFKEESVIHQRKVYSFIHLSVQEFLAAFYAFYHYAIKIFDNLQFCDVMHN
LHRDATDKALESENGHLDLFLRFLLGISLESNQRLLQDLLTHTENSSESIRRTTQYIKEK
IKDGHGLSTERSINLFLCLLEVKDQTLSREIQEFVKSDKHSEKKLSPAHCSTIAYMLQMS
EEVLDELDLNKYNTSDEGRRRLIPAVINCTKALLAGCNLSAQDCEIVSSALQSPNCVLRE
LDLSNNDLQDSGVKLLSDGLKSTNCQLQILRLSGCMVTEEGFGYVSSALSSNPSHLRELD
LSYNHPGESGVKLLSDKLKDPNCSQQILNLDHEGHFRIIPGLRKYACDLTLDPNTANTHL
ILSEGNRKARCVKEQQSYPYHPDRFENYEQVLCGESLTGRCYWEAELRGWGHLAVTYKGI
NRKGGIDCRFGLNERSWNLYCCDTIYSYWHNNKANSISIPPSSSLSNRVGVYVDVSAGTL
SFYSVSDTHTLTHLHTINTTFTEPLYAGFGFYNDSAVSLCQI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccataatgagagagaaggtgaggacactgcgtctgaaaggagttctccatct
cctggatccagcggtgtgtctgtgaagagtgatcaatccatgaggaaacttccctctgga
tccagtgatgcaacagtgacctctgaccccagcatcaggaagagacagagatcagagtct
ccagaacccagcggtgtgtctctgaagagtaactcatccatgagaaaacctcttcacttc
agtgaggaaccactgacctctgaaccactgttaacgatcaaaactgaatcagtcccgcaa
aatagagacccgcggagagttaaagaccagcacaaaaccagcatgaagaacaagtatgag
agatcatatgagggaaccaaactccaagagaatgaaaccctcctgaacaggatctacaca
cagctctacatcatagagggagagagagaaggagtgaatgaagaacatgagattttacag
atggagaaaacagcccgaacacaacactcacaagacactccgatccactacaatgacatc
tttaaagcctctcctgaaccaggacgccaggagaaacagcagatcaagactgttcttact
aaaggcatcgctggaatcgggaaaaccgtctctgtgcagaagttcattctggactgggcc
gaaggaaaagacaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaac
ttgatccgagatcatcagtacagtcttcacagacttctgctggactttcatcctgaactt
caagatctggactcaaagatgtatgaggagtgtaaagttgtgttcatctttgatggtctg
gatgaaagcagaatcacactgatgttttcagacgctcaggaagtttctgatgtgactgag
acttcatcagtgggtgtgttgatgtcaaacctcattaaaggagatctgcttccctctgct
ctcatctggatcacctccagaccagcagcagccaatcagatcccttccaaatacatccac
cgtctgacagagattcagggattcaatgagcctcagaaggaggaatatttcaggaagaga
atcagtgacgagcatcaagccagcagaatcatctctcacatcagaagagcaagaagcctc
cacatcatgtgccacatacccgtcttctgctggatctcctccactgtgcttcagaagctc
ctggaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttc
ctgctgattcagatcaacatgaggaatcagaagtatgaagagagagatccagagaaactc
ctgcagtccaacagagaagtgattatgaaacttgcggaagtggctttccatcagctgaag
aagggcaatgtgatgttctatgaggaggacctgattgagagcggcatagacgtcactgac
gcctcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcatcag
aggaaagtctacagcttcattcatctgagcgttcaggagtttctcgctgctttctatgca
ttttatcattatgctatcaaaatttttgacaacttgcaattttgtgatgtgatgcataat
ctgcacagggatgcaactgataaagcccttgagagtgagaatggacatctggatctgttc
ctgcggttcctgctgggcatctcactggagtccaatcagagactcttacaggatctactg
acacacacagagaacagctcagagagcatcaggagaaccacacagtacattaaagagaag
atcaaagatggacatggactctccactgaaagatccatcaatctgttcctctgtctgctg
gaagtgaaagatcagactctgtccagagagattcaggagtttgtgaaatcagacaaacac
tcagagaagaaactctctcctgctcactgctcaacaatcgcctacatgcttcagatgtca
gaggaggtgctggatgagctggacctcaacaaatacaacacatcagatgaggggagaaga
agactgataccagctgtcatcaactgcactaaagctcttcttgctggctgtaatctctct
gctcaggattgtgaaattgtgtcatcagctcttcaatccccaaactgtgtcctgagagag
ctggatctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgatggactg
aagagtacaaactgccagttgcagatattgaggttgtccggctgtatggtgacagaggaa
ggctttggttatgtgtcttcagctctgagttcaaacccctcacacctgagagagctggat
ctgagctacaatcaccctggagaatcaggagtcaagctgctctccgacaaactgaaggat
ccaaactgctcacagcagatactcaatttggatcatgaaggtcatttcaggatcattcca
ggactgagaaaatatgcctgtgatctcaccctggatccaaacacagcaaacactcatctc
atcctgtctgaggggaacagaaaggcaagatgtgtgaaagagcaacagtcgtatccttat
catccagacagatttgagaactatgagcaggttctgtgtggagagagtctgactggacgc
tgttactgggaggctgaattgagaggatggggtcatttagcagtgacatataaaggaatc
aaccgtaaaggtgggattgactgtcggtttggactgaatgaaaggtcctggaatctttac
tgttgtgatacgatttactcgtactggcacaataacaaggctaacagcataagcattcca
ccctcttcatctttatctaatagagtaggagtgtatgtggacgtgtcggccggcactctg
tctttctatagcgtctctgacacacacacactcacgcacttgcacacaataaacaccaca
ttcactgaacccctctatgctggatttgggttttacaacgattccgcagtgtctttgtgt
cagatttaa
DBGET
integrated database retrieval system
