Pimephales promelas (fathead minnow): 120488000
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Entry
120488000 CDS
T08155
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b isoform X1
KO
K04256
c-opsin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120488000 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pprm04030
]
120488000 (tmtopsb)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120488000 (tmtopsb)
G protein-coupled receptors [BR:
pprm04030
]
Rhodopsin family
Vision
Opsin
120488000 (tmtopsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
120488000
NCBI-ProteinID:
XP_039540375
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MIESNMSRGCAWCAAGGDGTSAHLDENHSEHSLSPTGHLVVAVCLGFIGTFGFLNNTLVL
ILFCRYKVLRSPMNYLLVSIAVSDLLVCVLGTPFSFAASTQGRWLIGRAGCVWYGFINSC
LGVVSLISLAVLSYERYCTMMGATQADSTNYKKVAMGIAFSWIYSMVWTLPPLFGWSCYG
PEGPGTTCSVNWAARTANNVSYIICLFFFCLILPFIVIVYSYGRLLQAITQVSRINTVVS
RKREQRVLFMVITMVVCYLLCWLPYGIMALLAAFGRPGLVTPAASIVPSVLAKTSTVINP
IIYIFMNKQFCRCFHALIMCTTPQRGSSFKNSSKVTKTLRTVRRANGQNVTFAVASAGHP
TICAPHSGGPKSSSEGEKPSPGAGQPTNRPVVSLVAYYNG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtccaacatgagtcggggttgcgcgtggtgcgctgcaggaggtgacgggacc
agcgcgcatttggatgagaatcactcagaacacagtctgagcccgacgggacacttggtg
gtcgcggtgtgccttggattcatcgggactttcgggtttctcaacaacacgctcgttctc
attctgttctgtcgctacaaagtgctgcgctcgccaatgaactatcttctggtgagcatc
gcagtgagtgatctgctggtgtgcgtcctcggcactccgttcagcttcgccgctagtacg
cagggacggtggctcatcggacgcgcgggatgcgtgtggtatggcttcataaactcatgt
ctgggcgtcgtgtctctaatctcgctggcggtgctttcttacgagcgctactgcaccatg
atgggggccacgcaggccgactctaccaattacaaaaaggtggccatgggtattgccttc
tcctggatatattccatggtttggactcttcctccactgtttggatggagctgctacggt
ccggagggtcccggcaccacgtgcagtgtcaactgggccgccaggacggccaacaacgtg
tcttacattatctgtctgtttttcttctgccttattctcccttttatcgtgattgtctac
agctatggaagactcctccaggctatcacacaggtgagccggatcaatacggtggtgagt
cgtaaacgggagcagcgtgtgctcttcatggtgatcacaatggtggtgtgttacctgttg
tgttggctgccctatgggattatggccctgctagccgcgtttgggcggcccggcctggtc
acaccagcggccagcattgttccttctgtgttagccaagactagcaccgtcataaacccc
atcatctacatcttcatgaacaaacagttttgcagatgcttccatgcgctcatcatgtgc
accaccccacagagaggctccagctttaaaaactcctccaaagtcaccaaaactctcagg
acagtgcggcgcgccaatggccagaatgtgaccttcgcagtggcctcggctggccatcct
actatctgtgccccacacagcggggggccgaaaagttcctccgagggtgagaaaccctct
cctggtgcgggccagcccaccaacagacctgttgtctctcttgtggcctattacaatggt
tga
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