Pimephales promelas (fathead minnow): 120488132
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Entry
120488132 CDS
T08155
Symbol
ptchd3a
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120488132 (ptchd3a)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
Patched domain-containing proteins
120488132 (ptchd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
120488132
NCBI-ProteinID:
XP_039540566
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MPVNMAGCTTDCVEKPISICFQKFGRFVGTYPWWFFISPLVISAVLGSGFYFLEEREAND
IEDQFTPVNGPAKLERQFVQENFPQNDSVFSNQRLYTDGVYASFIAVSRSSNILTDAAFQ
EIVTLDRKVKELNVTMGHEVLTFEGLCARRYKKCIPNKILDIYKYYGNDLEKTELTFPFF
RFGFSYIFLGYSVGGVSINSTVIKSAKSVRLLYFLKEDNRTRTDLWLNEFLKVFPSNLSL
SFIKVTHSTSLSRQVEFEANTKDVIPLFSITYVIAIAFSILSCLRFDCVRNKVWVATFGV
LSAGLAVLSAFGMMLHIGVPFVMTVANSPFLILGIGVDDMFILISCWQQTNVHDQVETRL
SKTYKEAAISITITTLTDVLAFYIGLMTPFRSVRSFCLYTSTSILFCYIYSITFFGAFLV
LNGRRENSNKHWLTCKEVPEECPIDQSKWYELCCVGGAYDPHTGKEEVQPMNHFFKKYYG
PFLTKSWTKVFVIVLYCFYLIISIYGCFQIQEGIDLRNLAADDSYVVKYYDNEKAYFSEY
GPNIMVVIRREFPYWDEKYMSDLETCIEDFKNLSFIEKDIFTSWIKSYKYYGYHSKLNLS
AEDVFKDNLGSFLRFYSDFKQDVNFTNNSIHASRFFIQTVNISTALDEMNMLNKLRETAQ
KCPVPLLVYHPAFIYHDQYAVIVTNTIQNIAVTTAVMLLISLLLIPNPLCSLWVTFSIAS
VIVGVTGFMALWDVNLDTISMIILVVCIGFSVDFSAHISYAFVSNKKPSANEKAVEALFH
LGYPILQGAVSTILGVVVLSASKNYIFRTFFKIMFLVIFFGLFHGLTFIPVFLTFFDMCS
GTPANKKSGPEEQVMKNSHANNVQAMARDGEVKEREIYDNRNFQPDNHRTCQSQPCSAIW
MITGNNHRVQENHMCVASTIPMFRVDSQTYEVHMYTPSDDTMLRVNCQPKGQNSEGQNCV
LGNRNHIQDSNVPTLNCSDLAIL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaacatggctggatgcaccacagactgcgtggagaagccgatctccatctgc
ttccagaagttcggccgctttgtgggaacttacccgtggtggttcttcatctctcctctg
gtgatctctgcggtgctggggagtgggttttatttcttggaagaacgcgaggccaatgat
attgaggatcagttcacacctgtaaacggtcccgccaagctggagaggcagtttgtgcag
gaaaactttccgcagaacgactcggtgttctccaaccaaagactctacacggatggagtt
tacgcgtccttcattgcggtatcaagatcctccaacatcctcacagatgctgcttttcag
gagatagtcactttagacaggaaggtcaaggagctgaatgtgactatgggtcacgaggtg
ctcacttttgagggactttgcgcgagacggtacaagaaatgcatacctaacaagatactg
gatatttacaaatattatggtaacgatttagaaaagaccgagctcaccttcccgttcttt
cgtttcggattctcgtacattttcctgggctattctgtcggtggagtgagtataaactct
actgttattaaaagtgcaaagtcagtgcgcctgttatatttcctaaaggaggataatcgt
accagaacagacttatggctgaacgaattccttaaggtttttccatctaatttatcacta
agcttcattaaggtgacccattccacatctctgtcaaggcaggtggaatttgaggcaaac
acaaaggatgtgattcccctcttctctatcacatacgtcattgccattgcattctcaatt
ctttcttgtttgaggtttgactgtgtcagaaataaagtatgggtggccacatttggggtg
ctctccgctggattggctgttctgtcggcttttgggatgatgttacacattggtgtcccg
tttgtcatgacagttgctaattctccattcctaatattagggatcggagtggacgacatg
ttcatcctcatttcctgctggcagcagacgaatgtccacgatcaagtagagactcgactg
tctaaaacgtacaaagaggcggccatttcgatcaccatcacaacgctcacggacgtgctc
gctttctacatcggcctcatgacgcccttccgctccgtccgctccttctgcttgtacacc
agcacctccatcctcttctgctacatctacagcatcacatttttcggagcgttcctcgtt
cttaacggacggcgagagaacagcaacaagcactggctgacctgcaaggaggtaccagag
gagtgccctatagatcagtcgaagtggtatgaattatgttgcgtgggaggcgcttacgac
cctcatactggcaaggaggaggtacagcccatgaaccacttctttaaaaaatactacggc
ccttttctgacaaagtcgtggaccaaggtctttgtgatcgtgctttattgcttctatttg
attatcagcatttatggctgcttccaaattcaagaaggaatcgatcttcgcaatttggca
gctgatgactcttatgtggtaaaatactacgacaacgagaaggcatatttctccgaatat
ggcccaaacatcatggttgtcatccgacgggaatttccgtactgggacgaaaagtacatg
tcagatcttgaaacttgcattgaagatttcaaaaacttatcgttcattgaaaaggatata
ttcacgtcctggatcaaatcatacaagtactatggatatcactccaaactcaatctgagc
gccgaagacgtcttcaaagataacttgggatcgtttctgcgattctattccgatttcaag
caggacgtcaatttcaccaacaactccattcacgcgtctcgctttttcatccagactgta
aatatttctactgccctggatgagatgaatatgttgaataaattaagagagacagcacaa
aagtgccctgtccctttactggtttaccatcctgccttcatctaccatgaccagtatgca
gtaatagtcaccaacaccatccagaatatcgcggtgacgacagccgtaatgttgctcatc
tcccttctcctcatcccaaaccctctgtgctctctctgggtgacgttttccatcgcatcg
gtcattgtgggggtcactggtttcatggcattatgggatgttaatttagacaccatctcc
atgatcattcttgttgtctgcattggtttttctgtagacttctccgctcatatatcttac
gcctttgtctccaacaaaaagcccagtgcgaatgaaaaggcagtggaggccttgtttcat
ttaggttaccctattttgcagggggctgtgtctactattcttggggtggtagtgttgtct
gcttcgaagaactacatctttagaacgttctttaaaattatgttcttggtaatattcttt
ggtctgttccatggcttaacttttatcccagtttttctgaccttttttgacatgtgtagt
ggcacaccagctaacaagaaatcaggcccagaagagcaggtcatgaagaacagccacgcg
aataatgttcaagcaatggctagggatggtgaggtgaaagagcgggaaatttacgacaat
cgcaattttcaacctgacaaccaccgaacgtgtcagtctcagccgtgctctgccatatgg
atgataactggcaataatcatcgtgtccaagaaaatcacatgtgtgtggcaagcaccatc
ccaatgttcagagtggacagtcagacctatgaggttcacatgtatacaccttctgatgat
accatgttaagagtcaactgtcaaccaaaaggtcaaaactctgaaggtcagaattgtgtt
ttaggaaataggaaccacattcaagattcaaatgttcccactcttaactgttctgatttg
gccattttgtaa
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