Pimephales promelas (fathead minnow): 120488170
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Entry
120488170 CDS
T08155
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120488170 (ptbp2a)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120488170 (ptbp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
120488170
NCBI-ProteinID:
XP_039540637
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MEKDKTESAETPAPPACEVIFPFSVTPCGAVLFVAWMHVSQDGSSSCLCQTKSVRPGVNN
ARVLHTPARDPASHLAASESACDPGEKWGYKVVVAVLQSCAVPLSNSTASQTQKQHFMKR
SIGDVAVGVKRGSDELLSGGMYNSPSSGLSSISDTTSNGSDSKKLRVEERVGDAPPSRVL
HIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTPHV
RSMPVYIQYSNHKELKTDNSNQSGGTPTSGSNSSNGGGAASSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFNDPTNAQQAKVALDGQNIYNSCCTLRIDYSK
LVNLNVKYNNDKSKDYTRPDLPAGDGQPSLDPAMAAALGKDSSSLLGKIPGALSPLSAAA
AAAAAAGRVALSGHTGSGGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDSAL
IQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRF
KKPGSKNFQNIFPPSGTLHLSNIPQDINEEDIRVLFTNSGGTVKAFKFFQDHKMALIQMT
TVEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacaaaaccgagtcagcggagacccccgcgccacccgcgtgtgaagtaatt
tttccgttttctgtgactccctgtggtgccgttctatttgtcgcatggatgcacgtttct
caggacgggagcagttcctgtttgtgtcagacgaagtcagtgaggcctggtgtcaataac
gctcgggttcttcacacacctgccagagatccagcatcacacctcgcagcctcagagtcg
gcctgtgacccaggtgaaaaatggggctataaagttgtggtggcagtgctgcagtcctgt
gctgttcccctgagcaattccacagcctctcaaacacagaagcagcatttcatgaagaga
agcattggtgatgtcgcagttggtgtaaagagaggatcagatgagctgctgtccggcggc
atgtataacagccccagttctgggctgagcagtatcagcgatacgacatccaacggcagt
gacagcaaaaaacttcgagtcgaagaaagagtcggcgatgctccaccgtcccgcgttctc
cacatcagaaagttacccaatgatgtctcggaaacagagatcattgcacttgggcttcct
ttcggaaaggtcaccaatatcctcacgctgaaaggcaaaaaccaggcgtttctggagctc
agcacagaggaagccgccatgacaatggtcaattattactcggctgtgacgcctcacgtc
cgtagcatgcctgtctacatacagtattctaatcacaaagaactcaagacagacaattca
aaccagtcaggtggtactcccacatcagggtccaactctagcaacggtggcggtgcggcc
tccagtccagtactgagaataatcattgataacatgttttaccccgtcaccctggatgtg
ctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcaccaagaac
aatcaatttcaggccctgttgcagttcaacgacccaaccaatgcacagcaagctaaagtg
gctctagatggtcagaacatttacaattcctgctgtacccttcggatagactactcaaaa
ctcgtcaacctgaatgtgaaatacaataacgataagagcaaggactacaccagaccggat
ctccctgctggagacgggcagccctctctggatcccgctatggctgctgccctgggtaaa
gactccagttccctgctcggtaagatcccaggtgccctgagtccattgagtgcggccgcg
gctgctgctgctgcggctggaagagtcgctctgtccgggcacacggggtcaggtggagtg
ctgcttgttagcaatctaaacgaagagatggttacgccccacagtctgtttaccctcttc
ggagtttatggggacgtgcagcgtgtgaagattctttttaataagaaagacagcgcactg
atacagatggctgatatgaaccaggctcagcttgctatgagccatctaaacggtcagaag
atgtactcaaagatcattcgcgtcacgatgtcgaagcatcagaccgttcagttaccgaga
gatggtttagatgaccagggtctcacaaaagacttcacaaactcaccactgcaccgtttc
aaaaagcccggctccaagaactttcagaacatcttccctccttccggcacactgcatctg
tcaaacatcccgcaagacataaatgaagaagacatcagggtcctgttcacaaattcgggt
ggcactgtgaaagctttcaagtttttccaagatcacaaaatggccctaattcagatgaca
accgtcgaagaagctattcaatgcctgatcgaccttcacaattacaacatgggtaataac
caccacttgaaggtgtccttctccaaatcaaccatctaa
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