Pimephales promelas (fathead minnow): 120488195
Help
Entry
120488195 CDS
T08155
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120488195
03041 Spliceosome [BR:
pprm03041
]
120488195
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120488195
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120488195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_PNO1_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
120488195
NCBI-ProteinID:
XP_039540706
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSEYSAVPPPGPGAALGAVVLKKDAFADAVQRARQIAAKIGGDVTGTPMSNNGGSESYPF
ASQKRSLEDGDQPESKKMASDRDNPASLSIGAQLAALSQQSVRPSSLTEEYRVPDGMVGL
IIGRGGEQINKIQQDSGCKVQIAPDSGGLPERSVSLTGGPEAIQKAKMLLDDIVSRGRGT
PPSFHESTNGSGNMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMDK
PLRIIGDPYKVQQAREMVQEILRERDHPGFDRNEYGSRMGGGGGGGMEEGQHTVQVPVPR
HSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGTGPDKIAHVMGPPDRCEHAASIINELLQ
SIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGNWGPPGGEMTFSIPAHKCGLVIGRGGEN
VKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEDKIEGPLCPVGPGP
GGPGPAGPMGPYNPNPYQPGPPGGPQHGGPPGGQYPQGWGNAYQQWQPQDPSKAATDPNA
AWAAYYAQYYQQPGGGAMPGQAPAAQPAAPADPGQAAPGTAQPDYTKAWEEYYKKMAAAG
GGAAPAAAAGGGAQAAGAAAAGQTDYSAAWAEYYRQQAAYYGQTGQAPGQPGATPQGQQA
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatacagcgcggtgccgccgcccgggcccggagcggctctaggagcagttgta
cttaagaaagacgcgttcgccgacgctgttcaacgcgcacggcagatcgctgcaaagatc
ggtggagatgttacgggaacccccatgagcaataacggtggatcggagagttatcccttc
gcgtcacagaagcgatcgttggaggacggagatcaacccgaaagtaagaagatggcgtct
gacagggacaaccctgcatccttgtctatcggagcccagctggctgccctttcccagcag
agcgttcgtccctcgtctctcacagaagagtacagagtacctgacggcatggttgggctc
atcattggtcgcggtggagagcagatcaataagatccagcaggattctggctgtaaagtt
caaattgctccagacagcggtggtcttccggagaggagcgtgtctctcaccggcggccct
gaagccatccagaaggccaagatgctactggatgacatcgtctctcgggggcgcggaact
ccgccctctttccacgagtcgaccaatgggagcggcaacatgcaggaaatgatcattccg
gcagggaaagctggtctcatcatcggcaaaggaggcgagaccattaaacagttgcaggag
cgagccggtgtgaagatgatcctgattcaggacgcgtctcaggggccaaacatggacaaa
ccactgcgcatcattggagatccttacaaagtccagcaagcgcgtgaaatggtgcaggag
attctgcgtgagcgggatcaccccggcttcgacagaaacgagtacggctctcggatgggt
ggaggaggtggcggaggaatggaggagggtcaacatactgttcaggtgcccgttcctcgc
cactctgtgggcgttgtgattggccgaagcggagagatgatcaagaagattcagaacgat
gccggtgtgaggatacagtttaaaccagatgacggcactggtccagataagatcgctcat
gtaatgggtcctcctgaccgctgcgaacacgctgccagcatcatcaacgagcttctgcag
agcatcagagtacgagaggaaggaggagggggtccgccgggtcctcctggcacaggcatg
cccccgggtgggcgaggcaggggtcgcggcccaggcaactggggtccgcctggtggagag
atgaccttctcaatccccgcacacaaatgcggcctcgtgattggccgaggtggcgagaac
gtgaaggcgatcaaccagcagaccggcgcctttgtggagatctcacgccagccgccgccc
aacggagacccgaacttcaaactgttcaccatccgcggctcccctcagcagatcgaccac
gccaaacagctgatcgaggacaagatcgagggtcctctgtgccctgttggtccaggaccg
ggcgggccaggccccgctggacccatgggcccctacaacccaaacccgtaccagcccgga
ccccctgggggaccacaacacggaggtcctcctggaggccagtatcctcagggttgggga
aacgcgtaccagcagtggcagccgcaagatcccagtaaagcagcaacagatcctaacgca
gcgtgggcggcttattacgcacagtactaccagcagcccggagggggcgctatgccagga
caggctcccgcggcccagcccgccgctcccgctgacccgggccaagcggccccaggcact
gcccagcctgactacaccaaggcctgggaggagtactacaaaaagatggccgcagcagga
ggaggcgctgcccccgcggccgcagcaggaggaggagctcaggccgcaggagccgcggcg
gcgggacagaccgactacagcgccgcgtgggccgagtattacagacagcaggcggcgtat
tacgggcagacgggacaggcccccggacagcccggggccacaccgcagggccagcaggcg
cagtga
DBGET
integrated database retrieval system
