Pimephales promelas (fathead minnow): 120488209
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Entry
120488209 CDS
T08155
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120488209 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120488209 (nup58)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120488209 (nup58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
GCP_N_terminal
Nup49_C
FapA
XAC0095_dom
PSY3
MSC_0620_UU052
Phage_int_SAM_2
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
120488209
NCBI-ProteinID:
XP_039540723
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSGFNFGTSTLGSSTTGGGFSFGAATSTPAAGTGGFTLGGFGTPSSAPAATSTTSTLGFG
SSVFAQKPTTGFSFNTPASGAAPSSTGLTLGSLTTSTAGSTGFSLGFGKPAASAAPFSLT
TTTSAPPGTGLTLGSVLTSTAPQTSSTGFSLNLGGGTTTSSAPAPGFSFSSSLFSNPTLT
GLGQSTLGGGLSLGGLVSSSATATSVPAPSLGLGGVDFSTSSEKNTDKLSSTRPEDSKAL
KEENLPGPICQDVDNFQKFVKEQKQVQEEISRMSSKAILKVQEDIKTLRQLLSVCASGLQ
RNSLSIDKLKLETSQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQYRQ
QIEELENHLTTQSSGSHITPQDLSLAMQRLYQTFVALAAQLHAVHENVKTLKHQYLGYRR
AFLDDSSDVFESKRVAGKKWQSSPHVTTGPAPFGSVPNAAAVAMAATLTQQQQPAQGPQA
PLGASFGTPFSSGIGTSMGSSSLGAFGSGPGFGGATGGLSFGFSSSKPSGGSLSAGFGTS
NTSGFNFSNPGINASAGLTFGVSNTQTPGFGTGGPLLQLKKPPAGNKRGKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctttaacttcggcactagtaccctcgggtccagcaccaccggcgggggcttc
tcatttggagctgcgaccagcacacctgctgcaggcacgggtggattcacactcggaggt
tttggcacgccgtcctccgcaccggccgcaactagtacaacctcaacactgggatttggg
tccagtgtatttgcacagaaaccaactactggattctcatttaacacacctgcctcaggg
gctgctccttcgtctaccggccttactttagggagtcttaccacctcgactgctggatcc
actgggttcagcctggggtttggaaagccagcggcctctgctgcacccttctcactgacc
accaccacctctgcacctccaggcacaggcctgactctgggctccgtcctcacctccaca
gcgcctcagaccagctccactggcttctcccttaacttgggaggaggaaccaccacttca
tctgcacctgccccgggtttttcctttagttccagtctcttttccaaccctaccttgaca
gggttgggacagtctacattaggtggaggtctgagtctgggtggtttagtctcgtcctct
gccacagccacctctgtcccagcacccagtctcggcctgggtggagtggacttcagcact
tcctctgaaaagaatactgacaagttatccagcaccagaccggaggacagtaaagccctc
aaagaggaaaacctccctggtccgatctgtcaagatgtggataactttcagaaatttgtc
aaggaacagaagcaagtacaggaagagatcagcagaatgtcctctaaagccattctcaaa
gttcaggaggacatcaagacgctcagacagctcctatctgtctgtgccagcgggctgcag
agaaattcgctgtccatagacaaactgaagttggaaacttctcaggaattgaagaatgct
gatatcgcacttcgcacccagaagacccctcctggactccaacatgaaaacacagcaccg
tctgattatttccggtctctggtggagcagtttgaggtccagttacagcagtaccgtcag
cagatcgaagaactcgagaatcatctgaccacccagagcagtggctcccacatcacacct
caagatttgtccttggccatgcagagactctaccagacgtttgttgcacttgctgcacag
ttgcatgcagttcatgagaatgttaagactctcaaacatcagtacctgggctatagacga
gccttcctcgatgactcctctgacgtgttcgagtcgaagcgtgttgccggcaagaaatgg
cagagctctccgcacgtcaccacaggccccgcccccttcggcagcgttcccaacgcagca
gccgttgccatggctgccactctcactcagcagcagcagccggctcaaggacctcaggcg
cccttgggggccagttttggtactccattttcctcgggtattggcactagcatgggctca
tcaagcctcggagcgtttggtagcggccctgggtttgggggcgcaacaggaggtttgtcg
ttcgggttttcctctagcaagccatctggagggagcctgagcgcagggtttggaacatct
aacacctcgggcttcaacttcagtaacccaggcatcaatgcgtcggctgggttgaccttt
ggcgtttccaacacacaaactcctggatttgggacaggtgggccactgctacagcttaaa
aaaccaccagcgggaaacaagaggggcaagagataa
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