Pimephales promelas (fathead minnow): 120488242
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Entry
120488242 CDS
T08155
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120488242 (stag1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120488242 (stag1b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120488242 (stag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
120488242
NCBI-ProteinID:
XP_039540794
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MINSEFPVLQDSSNDGQGDTVSLSMSVSELDDPGEGKGKKKRGRPGKQGVANKKARRSPV
DKVGRRPNGVAHQNGEGADPSTLFEVVKQGKSAMQSVIDDWIESYKQDRDLALLDLINFF
IQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMAGPQWKKFRYNFCEFIMV
LIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQ
DNTQRQYEAERNKVAGKRANEKLELLLEKRKELQENQDEIENMMNSIFKGIFVHRYRDAI
AEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRELF
PKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYSAH
RPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYL
VDSLWDSSQDLLKDWDCMVELLLEDPVPGEEVLGDRHESALIELMVCTIRQAAEAHPPVG
RGTGKRVLTAKEKKMQIDDKNRLTEHLIVALPMLLSKYQTDSEKVANLLQIPQFFDLEVY
SSGRMEKHLDALLKQIRVVVEKHTEMDVLEACSKTYSILCSEEYTIMNRVDIARSQLIDE
LTDRFSHSVEDLLQEADEADDDDIYNVLSTLKKLTAFHNAHDLTKWDLFKNCYRLLKMGI
EQGSMPEQIAVQALQCSHYSVLWQLVKITEGFPSKDDLVALRRVVKSFLAVCQQCLSNVN
TPVKEQAFMLLCDLLMIFSHQLVNGGRDALQPLVFNPDSSLQNELLNFVLDHVFIDQDDE
NQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKQYMKYYNDYGDII
KETLSKARQMDKIQCAKTLILSLQQLFNELILDQGPNLDRTSSHVSGIKELARRFALTFG
LDQIKTREAVATLHKDGIEFAFKVPNPKGPEYPPPNLAFLEVLCEFSSKLLRQDKKTVHS
YLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDDDRLSVTTGTSSSSKASTVRSKRGRPA
QHKKRPDEESVEGSWVIRNDNLQTPGGLHTPQLTSTVLRENPRQAADHIPDQDSSEPGSE
PDYMHNPQMQMSWLDQQKMEEVNRKERGGMNYMKSRTGGVRQQVRGLMEDDAEPIFEDVM
MSSRGQLEDMNEEFEDTMVIDLPASRNRRERAELRPDFFDSTAIMEDDSGFGMPMF
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactcagaatttcctgtgttacaggactcgtcaaatgacgggcaaggcgacacc
gtgagtctgagcatgagcgtaagtgagctggatgaccccggagagggaaaaggcaagaaa
aagagaggcaggcctggaaaacaaggagtggccaataagaaggcgcggagatctccggtt
gataaagtagggaggaggccgaacggagtggcccatcagaatggagagggggcagacccc
agcactctgtttgaggtggtcaaacaaggcaaaagtgccatgcagtctgtcattgatgac
tggattgaatcttacaagcaagaccgagaccttgcactcctagatctaatcaacttcttc
attcagtgttctggctgtaaaggcactgtaaggattgagatgtttaggaacatgcagaat
gctgaaattatcaggaaaatgacagaggagtttgatgaggacagtggcgactaccctctc
acaatggcaggaccgcagtggaagaaattccgatataacttttgcgagttcatcatggtt
ctgatccgtcagtgccagtacagcatcatctacgatgaatacatgatggacacggtcatt
tctctgctcactggactctcagactcacaggtccgagccttcagacacaccagcacgctg
gcagcaatgaaactgatgacagcactggtaaatgttgctctgaacctgagcatcaatcag
gataacacacagaggcagtatgaggctgaacggaataaggttgcagggaaaagagccaac
gagaagctggaactgctgctggagaagaggaaagagctccaagaaaatcaagatgagatt
gagaacatgatgaactcaatcttcaagggtatttttgttcaccgttacagggatgccatt
gcagagattagagctatttgcatagaggagattggagtttggatgaagttatacagtgat
gcttttctcaatgacagttacttaaagtatgtgggctggacgctacatgacagacaaggt
gaagttcgactcaaatgtctaaaggcccttcagaccctctacaccaacagagagcttttc
cccaagcttgagctcttcaccaatcgatttaaggaccgtattgtatctatgacgctggat
aaagagtatgatgtggcagtagaggccataagactggtcactttgatactacacggtagt
gaggatgctctgtctaacgaagactgtgagaacgtctaccatctagtgtattcggctcat
cggcccgttgctgtggctgctggagagttcctccacagaaagttgttcagcaggcatgac
cctcaggctgaggaggctttggcaaagagacgaggtcgaaacagccccaatgggaacctt
ataagaatgctggtgcttttcttccttgagagcgaacttcacgagcatgcggcatacttg
gtagacagtctgtgggacagctcacaggatctgctgaaagactgggactgcatggtggag
ctcctgctggaggaccctgtaccgggggaagaggtgttgggagaccggcatgagagcgca
ctgatcgagctcatggtctgcaccatcaggcaggcagccgaagctcatccgcctgtgggc
agaggaacaggaaagagggtgctcactgccaaggagaagaagatgcagattgatgataag
aatcgactcactgaacacttgattgttgctcttcccatgctactttcaaagtaccagact
gattctgaaaaggtggcgaacctccttcagatccctcagttcttcgaccttgaggtctac
agttcaggacgaatggaaaagcatctggatgcgctgctgaagcagatccgggtggtggtg
gagaagcacacagagatggatgttctggaggcgtgtagcaagacttacagcatcttgtgc
agtgaagaatacaccatcatgaaccgagtagacatcgctcgcagccaactcatcgacgag
ctcacggaccgattctctcactcggtggaagacctgctgcaggaggccgacgaagctgac
gacgatgacatttataatgttctttcaacgctaaagaagctcactgctttccataatgca
catgaccttacaaagtgggaccttttcaaaaactgctatcgattgttgaagatggggatc
gaacagggctccatgccagagcagatcgctgtccaggctctgcagtgctctcattactcc
gtcctgtggcagctggtgaaaataactgaaggatttccatcaaaggatgatcttgtggcg
ttaagaagagtggtgaagtcttttctagcggtttgccaacagtgcctgtctaatgtgaac
actccagtcaaagagcaggccttcatgttgctatgtgacctgctgatgatcttcagtcac
caattggtcaacggcggtcgagacgctctccagccattggtctttaatccagacagctct
ctgcaaaatgaactgctcaattttgtcctggatcacgtgtttatcgaccaggatgatgaa
aatcagagcatggagggtgatgaagaggatgaagccaataagatcgaggctcttcataag
aggaggaatctgttggccgccttctgcaaacttatcatctacgacatagtggacatgcct
gctgctgctgacatcttcaaacaatacatgaagtattacaatgactatggggatatcatc
aaagaaaccttgagtaaggccagacagatggacaagatccagtgcgcaaagaccctgatc
ctcagcttgcagcagctctttaatgagctgatcctggaccaaggacccaacctggaccga
acgtcctcacatgtcagcggcattaaggaactagcccgtcgctttgcactcacgtttggg
ctggaccagatcaaaaccagagaggctgtggccacactgcacaaggatgggattgaattc
gccttcaaggtcccgaatccaaaaggaccagagtacccaccaccaaacctggccttcctg
gaggttctctgtgagttctcctccaaactcctacgacaagacaaaaagactgttcattcc
tacctggagaagtttatgaccgagtatatgatggagagaagagaggacgtctggctgcct
ctcatcgcgtacaggaactccttgctgacaggaggagatgatgaccggttgtccgtcacc
accggcaccagttcatccagcaaagccagcacggtccggagcaaaaggggccgaccggcg
cagcacaaaaaacgtccggacgaggagagtgttgaggggtcgtgggtgattcgtaatgac
aatctccagacaccagggggcctccataccccacagctcacatcaactgtcctgagagaa
aaccccagacaggcagcagatcacatcccagaccaagactcatcggaaccaggctcagaa
ccagactacatgcacaaccctcagatgcagatgtcatggttggatcagcagaagatggag
gaggtgaacagaaaagagaggggaggcatgaactacatgaaatcacgcactggtggagtg
agacagcaggtgcgaggcctcatggaagatgacgccgagcccatcttcgaggacgtgatg
atgtcctcgcgcggtcagctagaggacatgaacgaggaattcgaggataccatggtgatc
gatctgccggcgtcgagaaaccgcagagaaagagctgaactcagaccggacttttttgac
tctacggccattatggaagatgattctggattcggaatgccgatgttttga
DBGET
integrated database retrieval system
