Pimephales promelas (fathead minnow): 120488278
Help
Entry
120488278 CDS
T08155
Symbol
pks1
Name
(RefSeq) highly reducing polyketide synthase pks5
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
adh_short
KAsynt_C_assoc
PP-binding
ACP_SdgA_C
adh_short_C2
CurL-like_PKS_C
Thiolase_N
PKS_DH_N
ADH_N
RhiE-like_linker
Rad10
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
120488278
NCBI-ProteinID:
XP_039540861
LinkDB
All DBs
Position
Unknown
AA seq
2089 aa
AA seq
DB search
MDMDIAIIGIGCNFPGGEGVDNFWKVLVEGRNCVVQIQDERFDTSEWFHPDESKPGKTQT
TKAALIEGFNEFDHKFFGISDAEADFMDPQQKLLLQCAYRALEDAGIPLEKVSGTQTGVY
IGLMNRDYETLLNNSPSTITHYNGTGTAMSIAANRISYIFNLTGPSFAIDSACSSSLVAL
HSACQAIRQGDCEMALCGGVSCILEPRVFVALSKAKMISPEGTSKPFCRTADGYGRGEGC
GVVLLKPLKKALEDFDHIWGIVKKTAVNQDGHTVTPITKPSMSQQEALLHMIYSSENHLA
NVQYVEAHGTGTPVGDPVEAGSISKIIAKERPSSLGPLFIGSVKSNIGHTESAAGVAGLI
KILLMMKHEIIVPSVFYSAQNSSIDAKALNLKIPTRAEKWLYSGSRKRMAGLNSFGFGGT
NAHALISEHVYATAPDSHNIEPLKLLPLSAATDQSLQLCIADTFQRILADETVDLQALAY
TAACRRSHMKHKFRKVFNASSVSELKSLLEASMNKKLAPIKQDLKLVFVFCGNGVTYRGM
CKQLLKEEPVFREKVKEVENYFQKFRCTSILQKIASSYDNEDFSKPNVVQPLLFAIQVAI
VHLLKHWGIRPDIVLGHSVGEVAAAHCSGLLSLEDAVKIVYHRSDLQAKVTGGRMLVIGN
IAVPNILEILPAYTGKICVAAVNSPMSCVLSGDKEAIDNVHQKLQSLKSKNLFLHVLDVP
AAYHSHMMDPILGQIKDSIGHLTVNEMKCELFSTVTGEKCNHGDFVTGEYWARNIRKPVA
FEQAIKLVSNHTRNTVFVEIGPRRALQRNIMEILGNDTTVLTSVHPDKDRETMFATVSKL
FELGVNVKWDEFYKGFETKLIAFPKYQFECKKNEVYFEDVRRGNDTISRSPHPLISPSKR
DGKVIKCNLSTGTTSFLWEHKNNGISIAPGALYVELAFASVMETAIPKRPLNSFQLTINF
QSLFVLTKNCPPLKITVDASKDATTFQVQSSSTVHASGTISHEAGPAMIEQQTIHLNAVL
ERCPSVIEAKDVYSTLNDVGFEYGPNFKQLGDIHYGQEFKEAVTSVRIAEGVLNHLYEYC
LHPVVLDNFLQMSSVLAVVSSTIRPGFPSAIGSMVISAPPCAKMFMYMRLTKEMPDYFEV
CGCFTDKDGHVLIELRNVRINFLGRHAQIRESCFFYNQKVEIHAESSFPSRIKALVFEDT
LGIAKGLEPYLHPKSVFVPPTKNSALQVQELLLRSPYSAVDMELDEILFIWGAHNITHLK
SEAILESLVDICELYRQVVLSLRSCSPVRSIRVITYKSAEGTVESISSGFVLSGMTRACA
AELSDTSFQLIDLSTVSTENLEALAHVLNSYKAQECPEVFIRKGKVYSAVITHTPVTTDT
TTTSLQSQDFTLQTTSPYRMTGLSAFPSASSIRTIESKNIEVQLSKVCVHSSDYFPVSTS
DLNFGQTMYWNKHTTQNHGLLALDFSGIITAVGKDVRKLKVGDHVVCCYPVKATSKVILP
EDVCFKMKRLPFLKDAPCVSYLVLIWQILQSVLPKSKQQQSLGIFSTDRDSALIKLLTLI
ASKSGWRVFTETEVSGLAQNTKQCLLFVILPPYDSLLLTDIVRVVNADHIIAVCGIREPC
YSTITGIQRVSERTCFQTLEMSKIFQKSGLKAHGALLQKWLKGMHLHKAWPSIQSSTFQM
APPQGIPPQSFEKSGSYFSASTLDVISLASDDTRSKMSAIPLLPRTKQLFLKEGVYIVTG
GLSGLGFETVKFIAHRGGGCIATLSRSAPSEKVQEEMSSLQKRYGVRILTLQCDVSVSEE
VMEAITVIAKHFLSPIRGVFHSAAVLHDGLLETLDRSLFQKVLQPKVCGALNLHLATLHS
QTLDYFVCYSSISSFIGNAAQANYAAANSFLDTFCHYRHNIGLAGQSINWGPLKLGLLMN
KDDFQKFLETKGLMIMDVAEIHEALEHCLLNNNPQQVVCKFNFRNLKNHVFSQNVSLKFR
LSALVEEELKNTTVVEYSRINVQSSVDDCVKGIMAEICSVDTDDLNDETALTALGIDSML
AMTLQNRLFQEIGVNIPLVALLDPSNTLSSLAELIKQRSDEDCEISVHL
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatattgcgatcattggaattggatgcaacttcccaggaggtgagggtgtt
gataatttctggaaagttcttgtggagggcaggaactgtgtggtacagattcaagatgaa
agatttgatacatcagagtggtttcatcctgatgagagtaaaccaggaaaaacacagacg
accaaagctgctctcattgaaggattcaatgagtttgatcacaagttctttggcatcagt
gatgctgaagctgatttcatggaccctcagcagaaactgttgctgcagtgtgcatatcga
gctctagaggatgctgggatacccttggaaaaagtgagcggaacccaaacaggagtttac
ataggtcttatgaacagggactatgaaacacttttgaacaacagtccaagcacaataact
cactataatggcacaggaacagctatgagtatagctgccaacagaatttcctatatcttt
aacctgactggaccatcttttgccattgacagtgcatgttcttcatccctagtcgccctt
cactctgcgtgtcaggccatcagacaaggggactgtgaaatggctctgtgtggaggggtc
agctgcatacttgagcctcgagtctttgtggccctcagcaaggcaaagatgatctcacct
gagggcacaagcaaaccattctgccgtactgcagatggctatggcagaggagagggatgt
ggtgtagtcttactgaagcctttgaaaaaggctcttgaggactttgatcatatttggggc
attgtgaagaagactgcagtaaaccaagatggccacaccgtcacgccaatcaccaaacct
tccatgtcccaacaggaggctcttcttcacatgatctactcctccgagaatcatttagca
aatgtccagtatgtagaagctcatgggactggaacaccagtaggagatccagttgaggca
ggaagtatctcaaaaatcatcgccaaagaaagaccttcaagtttagggcctctgtttatt
ggctctgttaagagcaacattggacatacagaatctgcagcaggtgtggcaggtctcata
aagattctcctaatgatgaagcacgaaatcattgtcccctctgtgttctactcagcacaa
aattccagcatagatgctaaagctctcaatcttaaaatccccactagagctgagaaatgg
ctgtactctggatccaggaaaaggatggctggattaaacagctttgggtttggtggcacc
aatgcccatgctttaatcagcgagcatgtttatgctacagcccccgacagccacaacatt
gaacctctaaaactgcttccactgtctgcagccacggatcagtctcttcagttgtgcata
gctgacacgtttcagaggattttggcagatgaaacagttgatctacaagctcttgcttat
acagctgcctgcagaagaagccacatgaaacacaaatttaggaaagtcttcaatgcatca
tctgtatcagagttaaaatcactactcgaagctagtatgaacaagaaattagccccaata
aagcaggacctaaagttagtatttgtgttttgtggaaatggtgtcacttacaggggaatg
tgtaagcagctactgaaagaagaaccagtttttagggaaaaggtcaaagaggtggaaaac
tatttccagaagttcagatgcaccagtattttgcaaaagatcgcaagcagctatgacaat
gaagatttctcgaaaccaaatgttgtccagccacttctttttgcaatccaggttgcaatt
gttcaccttttgaagcactggggcatcagaccagatattgttcttggacactcggttgga
gaggttgctgcagctcattgctctggtctgctgtctcttgaggatgcagtgaagattgtc
taccatcgcagcgatctacaggccaaagtgacgggtgggaggatgctggtcattggtaac
attgctgtcccaaatattctggaaatcctccctgcatacacaggaaagatctgtgtagct
gctgtcaacagtcctatgtcatgtgtcctgtcaggtgataaagaagctattgataatgtg
caccaaaagcttcagtctttgaagagcaagaacctgttccttcatgtcttagatgttcct
gctgcctaccatagtcatatgatggatcctattctgggccaaatcaaagacagcattgga
catttaactgtaaatgagatgaagtgtgaactgttttccaccgtgacaggagagaagtgt
aatcatggggactttgtaacaggtgaatattgggcaagaaacatccgaaaacctgttgcc
ttcgaacaagcaattaaattagtttccaaccacacaaggaacacagtctttgtggaaatt
ggtccaagacgggctctgcagaggaacatcatggagatccttggaaatgacaccacagtg
ctaacttcagtgcatccagataaagaccgggagaccatgttcgccactgtatcaaaactg
tttgagctgggagtcaatgtgaagtgggacgagttctacaaagggtttgaaacgaagctt
attgctttcccaaagtatcaatttgaatgtaaaaaaaacgaggtatactttgaggacgta
agacggggaaatgacacaatctctcgaagtccacatccactgataagtccaagtaaacgt
gatggcaaagtgatcaagtgcaacctgtcaacaggtacaacctccttcctttgggaacac
aagaacaatggcatctcaattgctccaggggcattgtatgtagaattggcttttgcatct
gtgatggaaactgccattccaaagagacctcttaattcatttcagctcacaatcaacttt
caaagtttgtttgttttaactaaaaactgccctcctctgaaaatcacagttgacgcgtca
aaggacgcaaccacatttcaggttcagtcctcgagtactgtgcatgcatcaggcaccatt
agccatgaagcgggaccagctatgatagaacagcaaaccattcacctcaatgctgttttg
gagagatgtccatcagtcattgaagcaaaggatgtgtacagcactcttaatgatgtaggg
tttgagtacgggcccaacttcaaacaacttggtgacattcattacggacaagagttcaag
gaagcagtgaccagtgtcaggattgcagagggagtactcaatcatctatatgagtattgc
ttgcacccagtggtgctagataacttcttgcaaatgtcctcagttttagcagtagtctct
agcaccatcaggcctggatttccctctgcaattggtagtatggttatatctgcacctccc
tgtgcaaagatgttcatgtatatgagactgaccaaagagatgccagactactttgaggtt
tgtggttgtttcactgacaaagatggacatgtgttgattgagctaagaaatgtcagaatt
aattttctgggaagacatgcacagattagggaatcatgtttcttttataaccagaaggtt
gagattcatgctgaaagcagtttccccagtagaatcaaggctttggtctttgaggacacc
ttgggcatcgctaaaggtttggagccatatttgcacccaaaatctgtatttgttcctcca
acaaaaaactcagccttgcaggtccaagaattactgttgaggtctccgtacagtgctgta
gacatggaactggatgagatcctgtttatctggggtgctcataatattactcacctcaaa
tctgaagccattctagagtccttggtagacatctgtgaactttaccgtcaggttgttttg
tctttaagaagctgcagtcctgttcggtccatccgtgtcattacgtacaagtctgcagaa
ggaacagttgaaagtataagttctggatttgtgttatctggcatgacaagggcatgtgct
gcggagttgtcagacacttctttccagctcattgacctttctacagtgtcaacagagaat
ctagaagcactggctcatgtgcttaactcatacaaagcccaagagtgtccagaagtcttc
atccgcaaagggaaagtttactctgctgtaataactcatactcctgtcaccacagacacc
acaacgacttccctacagtcccaggacttcactttgcagacaaccagtccctacaggatg
accggcttatccgcttttccttcagcgagttcaatccgcactattgaaagtaaaaacatt
gaggttcagctaagtaaggtatgtgtgcactcttccgattattttccagttagtacttca
gacttaaactttggtcagacgatgtattggaacaagcacacaacacagaaccacggtctt
ctggcacttgacttcagcgggatcattacagctgtgggaaaggatgtccgcaaacttaaa
gtgggagaccatgttgtctgttgttatcctgtaaaagcaacttccaaagtcatcctccca
gaagatgtgtgtttcaaaatgaaaaggcttccattcctaaaggatgcaccatgtgtttca
tacttggtccttatctggcagatattgcagagtgtgttacccaagtccaaacaacagcaa
agtttgggaatcttctctactgatcgtgactcagccctgatcaagttactgacactcata
gcaagtaaatcaggctggagagtttttacagagactgaagtaagtggattagcccaaaat
acaaagcagtgtcttctttttgtgattcttcctccatatgattccttgcttctgacagac
attgtaagagttgtcaatgcagatcacatcattgcagtatgtggcatccgtgagccatgc
tactctacaataactggaattcagagggttagtgagagaacttgcttccagacacttgag
atgtccaaaatcttccagaaatcaggtcttaaggcacacggagctcttctacagaagtgg
ctaaagggaatgcacttacacaaagcatggccatcaatacaaagcagtacttttcaaatg
gctccccctcaaggtatacctcctcagtcatttgaaaagtctgggtcttatttcagtgca
agcaccctggacgtgatatccctggccagtgatgataccaggagcaagatgtctgccatc
cctttgcttccaagaacaaagcagctgttcttaaaggaaggtgtgtacatagttacaggt
ggtctctctggtttgggatttgaaactgttaagtttattgcccacagaggcgggggatgc
attgccactctctcaaggagtgcaccatctgagaaggtacaagaggaaatgagcagtctc
cagaagagatacggggtaaggattctcactcttcagtgtgatgtctctgtgtcagaagag
gtgatggaagccattactgtgattgcaaaacattttttaagtccaatcagaggggtgttt
cacagtgctgctgtgctacatgatggattactggaaacccttgatcgatctctttttcaa
aaagtcctgcaacctaaagtctgtggtgctcttaatctccaccttgccactctgcacagc
cagacacttgattacttcgtgtgctattcctcgatctcctcattcattggaaatgctgca
caagcaaactacgcagcggctaattcttttctggacacgttttgtcactaccgacacaat
attggacttgcaggccagtcaatcaattggggaccccttaaattgggcctgctaatgaac
aaagacgattttcaaaagttcctggaaacaaaagggctgatgatcatggatgtggcagag
atccacgaagcactagagcactgtctgttaaataacaatccccagcaggtggtctgcaaa
ttcaatttcaggaacctgaagaaccatgtcttttctcagaatgtgtctctgaagtttcgc
ctgtctgctttagtggaggaagaactgaaaaacaccacggttgttgagtactccaggata
aatgttcagtcatcagtggatgactgtgttaaagggattatggctgaaatatgcagtgtt
gatactgatgatcttaatgatgaaactgcgctcactgcattaggcattgactcaatgctg
gccatgacattgcaaaatcgcttgtttcaagagataggtgtgaatattcctcttgttgct
ttgctcgatccaagcaatacactatcctcattggctgaattgataaaacagagatcagat
gaagactgtgagatttctgtgcacctgtaa
DBGET
integrated database retrieval system
