Pimephales promelas (fathead minnow): 120488444
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Entry
120488444 CDS
T08155
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
pprm03015
mRNA surveillance pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120488444 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
120488444 (rbm8a)
03015 mRNA surveillance pathway
120488444 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120488444 (rbm8a)
03041 Spliceosome [BR:
pprm03041
]
120488444 (rbm8a)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120488444 (rbm8a)
Spliceosome [BR:
pprm03041
]
Complex C
Other components
EJC/TREX
120488444 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
120488444
NCBI-ProteinID:
XP_039541128
LinkDB
All DBs
Position
Unknown
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcatgaagcggggggtgaagactttcctatggacgaggat
ggtgatgagagcattcacaagttaaaagagaaagccaagaagaggaagggtcgtgggttt
ggatcagaggaaggagctagatcccgagtcagagaggactatgacacagtagaacaggat
ggagatgagcctggcccacagagatctgttgaaggatggattctgtttgtgactggtgta
catgaggaggcgacggaagaggatgtccacgacaagtttgcagagtttggagaaatcaag
aacttgcatctaaatttggacagaagaactggttaccttaagggctatgcactggtggag
tatgagacttacaaagaagcccaggctgcgatggaagggctgaatggacaagatcttatg
gggcaaccaatcagcgttgactggggctttgtaaggggaccacctaagagcaagaggagg
ggtggtagaaggcgcagcagaagccctgacagacggagacgttga
DBGET
integrated database retrieval system
