Pimephales promelas (fathead minnow): 120488675
Help
Entry
120488675 CDS
T08155
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120488675 (polrmt)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120488675 (polrmt)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
120488675 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
DUF5824
Motif
Other DBs
NCBI-GeneID:
120488675
NCBI-ProteinID:
XP_039541229
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MSLLRLCAYSAGLSRSFAVDRAVRFLNGDYCRLCIRIRSNGGRKIQDKTWATVYQRHYSA
IPKKEDGKKTFWEQSQLLDVLEARIQQLQSDVVVDVKHSKVQIIKMQQRLKKTAPGKSQK
NLPGEKAEMLKSGPAAKKGVTEGFKTHASRWMEKLNREKWIKPKNQTSHKMHDKPVPGKS
SKGSLMIPGTSSKTITTGKRSMTKTKVEATTSTATSSKGKENTLQKKAKRKVLRTSESSA
GRFPGFPEIPESSSSKVSATSTKGKPAMVTGNELVEKEELDVDQQSLTALERLLEDKEGN
RYGDPQLRIRCYLEACMFLDDVARAQNYLLCHHRQISKRTHLSISAYNIIMRMWAKKGSI
NQIRRLFVLIEEAGLKPNVTSFSAALECMGRMSACERSIITRCLQQMKVDGLSVEDVFSQ
CVFKNDEREMVLRAVQLVQPKYQPLVSKDQPVCSLPLVKQFYAEREGATYPKLDFSLKEL
QDRFSLQLAMEKATTVTIDSVEALKPVTDHMAKMRELLATQRRHWEKALLLALKEKKRIL
SNNSQRSWNSCIYPFLCILDDQDYVNIMLQSLDKLSPSGESLLFMAEEMGNKVHNLYRNR
RKIDSQMIEKLRSIYNSYAELLANDTKTNGMLPREFWTSLEMEKSSGPSLLSEDTPWPMV
LMVQLGSFLVDLMVHELKVRSNILNPAQEKKLIPVLYHMYTFRSNHKIGFIKPHPIVTQI
QRIAMETKLTFESYVMPMLCPPVPWVSPKSGAYLLTSTKLMRATDGAIQHQLLLEKSRDE
DLHAVLDSLNQVGNCPWKINKPLLDIIISIFNDKGSEKLSIPPPLSEAPEIPRFNPHDPS
YTQIEKAYMKREGAKAKKKVTEMHSLRMDALYKLSIANHMRDEIFWFPHNMDFRGRTYPQ
PSYFNHLGSDVTRALLVFAEGRPLGPKGLDWLKIHLVNLTGLKKRSSLAGRLEYAESIME
DILDSADHPLDGRKWWMTADEPWQALGCCMEIANASRSPDHTKFVSNYPVHQDGSCNGLQ
HYAALGRDMIGATSVNLMPCELPQDVYSGVAQQVEEFRARDAKEGLKIAQVLEGFISRKV
VKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKDYIWDASHYLVVQVFNSLKEMFTGTRE
IQDWLTESARLIARSGRTVEWVTPLGLPIVQPYHRIKYQTLKSSIQNLSINISHDASEKP
DSMKQKNAFPPNFIHSLDSTHMMLTSLHCYRAGLTFVSVHDCYWTHALTVDTMNKVCREQ
FVALHSQPILKELSGFLLRKYCSRPPIASKPKKFQEYYKMVQLLSSVPHTGDFNLEKVKE
SVYFFS
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgaggttgtgtgcctattcagcgggtttatctcgcagttttgcggttgac
agggctgtaagatttctaaatggcgattattgccgcttgtgtattcgaatacggagtaat
ggagggagaaaaattcaagacaaaacatgggctacagtttaccaaagacactattcagcc
atccctaagaaggaagatgggaagaaaacattctgggaacagtctcagttgttggatgtt
ctggaggccagaattcaacagctccaatctgacgttgttgtagacgtcaaacattcaaag
gtgcaaatcatcaaaatgcagcagagactaaagaaaaccgcacctgggaagagtcaaaag
aacttgccgggagaaaaagcagaaatgcttaaaagtgggccagctgctaaaaagggtgta
accgaaggtttcaaaactcacgcgagtcgctggatggagaaactcaaccgtgaaaagtgg
attaaacccaaaaaccaaacctcacataaaatgcacgacaagccagttccgggtaaaagc
agcaaagggagtttgatgattccaggtacatcttcaaagacgatcacgacgggcaagaga
agtatgactaaaactaaagtagaagccactacgtctaccgcaacttcctccaaaggcaaa
gaaaacactttgcaaaaaaaggcgaaacggaaggttttgagaacatcagaaagttcagcc
ggcaggtttccaggatttccggaaatccctgagtcctccagcagtaaagtttctgcgacg
tctactaaagggaaacctgctatggttacaggtaatgaattggttgagaaggaggagctg
gatgtagaccagcagagcttgactgctcttgaaaggcttttggaggataaggaagggaac
cgctatggtgatcctcagctcagaattcgctgttacttggaggcgtgcatgttcctggat
gatgtggctcgagctcagaactatttactatgtcatcaccgtcagatatccaaacgcacg
catctgtctatcagcgcctacaacatcataatgaggatgtgggccaaaaaaggttccatc
aatcagattcgtcgtttgtttgttctgattgaagaagcaggcctgaaacccaatgtcacg
tctttctccgctgctctggagtgcatgggccgaatgtctgcgtgtgaaagatcgatcatt
accaggtgtctgcagcagatgaaggtggacggcttgtccgtggaggatgtgttcagccag
tgtgtgtttaagaatgatgagagagaaatggtcctgagggccgtccaattggtccaaccc
aaataccaacctcttgtgtccaaagatcagcctgtctgttccctgccattggtgaaacaa
ttttatgctgagagggaaggagccacatatcctaaactggactttagtcttaaggaactt
caggaccggttcagtcttcagctggcaatggagaaggccacaactgtcactattgactcc
gtagaggccttgaagcctgtcaccgatcacatggccaaaatgagagaattactagcaaca
cagaggagacactgggagaaagctctcctcctggcactgaaggaaaagaaacggatatta
tctaacaacagccagaggtcctggaattcctgcatttacccattcctgtgtatcctggat
gatcaggattatgtgaacatcatgcttcagagtttagacaaactgtctcccagtggtgaa
tctttgctcttcatggctgaagagatgggaaataaagtccataatctgtaccgcaaccgg
cggaagatcgacagtcagatgatcgagaagctcaggagtatctacaactcgtatgctgaa
ctcctggcgaacgacaccaagacgaacggcatgctcccgcgggagttttggacgagtctc
gagatggagaagtccagcggcccctctcttttaagtgaagacaccccttggcccatggtc
ctgatggtgcagcttggcagcttcctggtcgacctgatggttcatgagctcaaagtccga
agcaacatcctcaatcccgctcaagagaagaagctcattcccgtcttataccacatgtac
acattccgtagcaatcataagatcggcttcatcaaaccgcaccctattgtgacacaaatc
cagaggattgccatggaaaccaaacttacatttgaatcctacgtcatgcccatgttgtgt
ccacccgtgccctgggtgtcccctaagagcggcgcgtacctgctgacgtccaccaagctg
atgcgtgccaccgatggagccatccaacaccaacttctcttggagaagagccgagatgaa
gatctccatgctgtgttggactccctcaatcaggtgggcaactgtccctggaagatcaac
aagcccctgttggacatcatcatctcgatattcaacgacaaaggcagcgaaaagctcagc
atccctcccccgctgtctgaagcgcctgagattcctcgcttcaaccctcatgacccgtcc
tacactcagattgagaaggcctacatgaagcgggagggtgccaaagccaagaaaaaggtg
acggagatgcacagcctccgaatggacgcgttgtataagctgtctatcgccaaccacatg
agggacgagatcttttggtttccacataatatggactttcgaggtcgtacgtacccccag
ccgtcttactttaaccaccttggcagtgacgtgaccagggccttgctggtgtttgccgag
ggacgacctctcggtcccaaaggcctcgactggttgaagatccacctggtgaacctcacg
gggttgaagaagcgtagctcgctagccggaaggctggagtatgctgagagcatcatggag
gacatcctagactcggcagaccatcctcttgacggtcgcaaatggtggatgactgcagat
gagccatggcaggcactgggttgctgtatggagatagcaaatgcctcgcgctcacccgac
cacaccaaattcgtctccaattatcctgtacatcaggatggctcatgcaacggcctccag
cactatgctgccctcgggcgggatatgattggtgctacttcagtgaacctcatgccctgt
gaactgcctcaggatgtctacagtggcgtagctcagcaggtggaagagttcagggctcgg
gatgcgaaggagggattgaagatcgcacaggtgctggagggcttcatcagcaggaaggtg
gtgaagcagacggtaatgactgtggtctatggcgtcactcggtacgggggtcgtctgcaa
atcgaaaaacggctgaaggaaatcgatgatttccctaaggactacatatgggatgcttca
cattacctagtggttcaggtttttaacagcttgaaggaaatgtttactgggacgagggag
attcaggactggttgacggagagcgctaggctaatagctaggtctgggagaacagtggag
tgggtgacaccgctgggacttcctatcgttcagccctaccaccgaattaagtaccaaacg
ctcaagagcagcatacagaatctgagcatcaatataagccatgatgccagtgagaaaccg
gacagcatgaagcagaaaaacgccttcccgcctaatttcattcactctctggactccacg
catatgatgctgacatcactgcattgttacagggctggtcttacgtttgtgtccgtccat
gactgttattggacccatgctctgacggtggacaccatgaacaaggtgtgtcgtgagcag
tttgtggctctgcatagtcagcccattctaaaagagttgtctgggtttcttctgcggaaa
tattgcagcaggcctccaattgcatcgaagccaaagaagtttcaagagtactataagatg
gtacagcttttgtccagcgttcctcatacaggtgatttcaacctggaaaaggtgaaagaa
tcagtgtatttcttcagctga
DBGET
integrated database retrieval system
