Pimephales promelas (fathead minnow): 120488704
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Entry
120488704 CDS
T08155
Symbol
ifit10
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 10
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120488704 (ifit10)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
120488704 (ifit10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_8
TPR_2
TPR_1
TPR_12
TPR_14
TPR_19
TPR_11
TPR_16
RMD1-3
TPR_CcmH_CycH
TPR_17
CFAP70_TPR_C
TPR_7
TPR-S
TPR_15
CFAP70_mid_TPR
TPR_20
TPR_6
TPR_YpiA_C
TPR_Psidin_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
120488704
NCBI-ProteinID:
XP_039541260
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MLRMEPDRTLRTKLHQLECHFTWALIKDDIDLPDVFNRLQEQIKMDLANKERLARTYSAL
AYVQFLQEFHEEAQNNLVISMELHIECQRNEFHKTLIVTYGNLAWLNYHMKNYKECESYL
MKLQKINETFPKEASSVPEVLGEKGWTFLKFSQKYYNRAKECFRKALELEPDEGEWNAGY
AIALYRTEFESMESNSEDSPTVNQLRRAIDKNPDDDVLKVLLSLRLLVFKKYKEAESLVE
KALERSPDHPHVNRYVGKFFRSRGSMDRSITLLKKALERSPDSSFIHHQLALCYKQKKIQ
LLQEQSHHTRGSRVQQIRDQCIYHLEKATSLTTSFISAMSELALLYGENLNTSRAEELFQ
VTFKTAEEKNDNLHVVHFYYAEFQLNCHKCDPLAIKHFMKCLKLSPKSIEGKRSAQILRR
IAENRIRRKSQQGEAYGILGFLHKEKGDKDKAIEYYEKALSYEDNDEFLSNLCALRLSI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatggaacctgacagaactttgagaacaaaacttcaccagctggaatgccac
ttcacctgggctctgataaaagatgatatagatctaccggatgttttcaatagactgcaa
gaacagattaaaatggacctggcaaataaagaaagacttgcccgaacttacagtgctttg
gcatatgtccaattccttcaggagtttcacgaggaggcacagaacaatcttgtgatatcc
atggagctccatattgaatgccaaaggaatgaatttcacaagactctgattgtaacttat
ggaaaccttgcctggttaaactaccacatgaagaactacaaagagtgtgaaagttacctg
atgaagcttcagaagataaatgaaacgtttccaaaagaggcttcttctgttccagaggtg
cttggtgagaagggatggacttttcttaaattctcacagaaatattacaacagagccaaa
gaatgtttcaggaaggctttagaattggaaccagatgaaggcgagtggaacgctggttat
gccattgctctgtatcgcaccgaattcgagagtatggaaagcaattcggaggattcgccc
acagtcaaccaactgagacgggccattgacaagaatccagatgacgacgttcttaaggtc
ctcttaagcttgcgactgcttgttttcaagaagtacaaagaagctgaaagcttggtagaa
aaggctttagaaagatctccagatcacccacatgtcaaccgatatgttgggaaattcttc
aggagtcgagggtctatggacaggtcgatcactcttttgaagaaagcgcttgaacgctca
cccgattcaagtttcatacatcatcagttggctctctgctataagcagaagaaaatccaa
ctcctgcaggaacaaagtcaccataccaggggttcaagagttcaacagattcgtgatcaa
tgcatctaccatttagaaaaggctaccagcctgacgacctccttcatttctgcaatgagc
gaactggcactgctatacggagagaacctcaacacatctcgggctgaggagctgtttcag
gtcactttcaaaacagctgaagagaaaaacgataatttgcatgtggttcatttttattat
gctgaattccagttaaattgccacaaatgtgacccgttagctatcaaacactttatgaaa
tgtctgaagctgagcccgaaatcaatcgaaggaaagagaagcgcccaaattttgaggagg
atcgctgagaaccggattaggaggaaatcgcaacaaggggaggcttatgggatactaggg
tttcttcataaggaaaaaggagacaaagataaagccattgagtactatgagaaagctctg
agttatgaagacaatgatgagttcctcagtaacctttgtgctctcaggctgtccatatag
DBGET
integrated database retrieval system
