Pimephales promelas (fathead minnow): 120488707
Help
Entry
120488707 CDS
T08155
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120488707
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
120488707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_14
TPR_19
TPR_12
TPR_11
CFAP70_TPR_C
TPR_CcmH_CycH
TPR_Slam
TPR_Psidin_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
120488707
NCBI-ProteinID:
XP_039541264
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSEMSSIQQSLQPKLDQLECHFTWDIKKVNLVLTDVLNRLEEQLKMMGLGWELGVARTHC
SLGYLEFLLEHKERALTHLLKSETLIKEKLGENCDKTLIVTYGNLAWINYHMKNYSECES
YLMKLLKINETLPTQPSSVPEVLGEKGWAYLKFSHKYCGRAVEVFQKAVELDPENSEWNA
GYAKALYRIEPSTSCTVDSPAIKQLRLAIDDNPDDNASRSLLGLKLWFCSKKLMDESEKL
VETALNGSPEDPHVIRYVGKYFRNQGSVDRSIALLMKALERSPNSSFIHHQLAMCYKKKK
IHLQKEKPDRGSQRNPGRGSQTEVNNARNEFIYYLEKATSLKANFIIAMSELALQYGERY
ELSKADSLFQRTFKIAREKNDGVHVVHCFYAEFQQYSKRCEDLAIRHYEECFKMNPHSSH
GERSAKKLMIIAQRRITFKPDDWEANEILALIYQNSEATKSHLATSDNEEDDEYHSNLSE
CLKGCTIYG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatgagttcaatccagcagagtttacaaccaaaactggatcagctggagtgt
cacttcacttgggacattaaaaaagttaatctagtcttaacagatgtcctaaataggctc
gaggaacagctcaagatgatgggtctaggatgggagttaggagtcgcacgaactcattgc
tctttaggatatttggaattccttcttgagcacaaagaaagggccctaacccacctgttg
aaatctgagacacttattaaagaaaaacttggagagaactgtgacaagactctaattgtt
acctatggaaatttagcctggataaactaccacatgaagaactactcagagtgtgaaagt
tacctgatgaagcttctgaagattaatgaaacattgccaacccagccttcatctgttcca
gaggtgctgggtgagaaaggatgggcctatcttaaattctctcacaaatattgtggcaga
gccgtagaagttttccagaaggctgtggaactggatccagaaaatagcgagtggaacgct
ggttatgccaaggctctgtatcgcattgaacctagtacatcttgcactgtggattcacct
gcgatcaaacagctgagattggccattgacgacaacccagatgacaatgcttcgagaagt
cttctaggacttaaactttggttttgttccaagaagttgatggatgagtctgagaaacta
gtggagacagctctgaatggctctccagaagatccacatgtcataaggtatgttgggaaa
tacttcaggaatcaagggtctgtggacaggtccattgcactgctgatgaaagcacttgaa
agatcaccaaactcaagtttcatacatcatcagttggcaatgtgctacaagaaaaagaaa
attcatttacagaaagaaaaaccagacagaggaagccagaggaacccaggcagaggaagc
cagactgaggtaaacaatgcaagaaatgagtttatctactacttagaaaaggcaacttct
ctgaaagctaactttatcattgccatgagtgagcttgcactacaatacggagagagatat
gaactgtccaaggcagacagtctgttccagagaacatttaagatagctagagagaaaaat
gatggtgtccatgttgtccactgtttctatgctgagtttcagcagtacagtaagagatgt
gaggacttagcaatcaggcactacgaggagtgtttcaaaatgaatccacattctagtcac
ggggaaagaagtgcaaagaaactgatgatcattgctcagagacgtatcacgtttaagcca
gatgattgggaggccaatgaaatactggcattaatttaccaaaactctgaggccaccaag
agccatttggccacttcagacaatgaagaggatgatgaataccatagtaatcttagtgag
tgccttaaaggatgcacaatttatggttaa
DBGET
integrated database retrieval system
