Pimephales promelas (fathead minnow): 120488787
Help
Entry
120488787 CDS
T08155
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120488787 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120488787 (gspt1)
03012 Translation factors [BR:
pprm03012
]
120488787 (gspt1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120488787 (gspt1)
Translation factors [BR:
pprm03012
]
Eukaryotic type
Release factors
120488787 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120488787
NCBI-ProteinID:
XP_039541370
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MDSRDIAPDSWEQEDDVEATADTELQSAFIGLNVNAPEFVPSFFSQGPAENDTSDGTDAV
ASMEISEPVAAVENGETDASAVETWEQKGERDEEEPGGGSPDDAGCCRDEEQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKETSELCPWYTGLPFIPHLDSLTNFT
RPTDGPIRLAIVDKYKDMGTVVLGKLESGCIGKAQQLIMMPNRNTVEVLSLLSDDVETEY
ASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacatagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtctgccttcatcgggctcaacgttaacgctccggaattcgta
ccatcctttttttctcaaggtccagcggaaaacgatacgtctgatggcactgatgcagta
gcaagcatggagatctcagaaccagtggctgcggtggagaacggagagacagatgccagc
gcagtggagacgtgggagcagaagggcgagcgggatgaggaggaaccaggaggtggatcc
ccggatgacgctggatgctgtagggatgaggaacaggatgaaatgatggaggaggatgaa
gagatgcccactcccaagctgcctcctcctccacccgatgcccctaagaaagaacatgtg
aacgtagtgttcataggacatgtggatgcaggcaagtctacaattggtggacagattatg
tatctaactggtatggtggacaaaagaacgctggagaaatatgaacgggaggcaaaagag
aagaacagagagacttggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagtcggaagagcctactttgagactgagaaaaagcactttact
attcttgacgctccgggccataaaagctttgtgcccaacatgattgggggggcatcccaa
gctgatttggcagtgctggtcatctctgccaggaagggtgagtttgagaccggttttgaa
aagggaggtcagacgagagagcatgccatgctggccaaaaccgctggagtcaaacatctg
atagtcctcgtcaacaaaatggacgatcccactgtgaactggagtttggatagatacgag
gaatgtaaagagaagttagtgccatttctgaagaaagtgggctttaatccaaagaaagac
attcacttcatgccctgctccggaatgacaggtgccaacctgaaggaaacttctgagttg
tgcccctggtacacgggattgcctttcattccacatctggacagcctgacaaacttcacc
agaccaactgatggtcccatcagattggctattgtggataaatacaaggacatgggcacc
gtggtgcttggaaaactggagtctgggtgtatcgggaaagcacaacaacttattatgatg
ccaaatcggaacacggtggaggtgttgagtcttctctccgatgatgtggagacggagtac
gcctctcctggcgaaaacctgaagctccggctcaaaggcatcgaggaggaagagattctc
ccaggatttatcctatgcaatgctgagaacctctgtcactcaggacgcacttttgatgcc
cagattgtcattattgaacacaaatccattatatgcccaggttacaatgcagtactacac
atacatacctgcatagaagaagtacagataacagcattaatctgtctggtggacaagaag
acaggagaaaagagcaagactcgcccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtctcagggctgcaggaactatctgcttagagacttttaaagacttccctcagatggga
cgtttcaccttgagagatgagggtaaaacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
DBGET
integrated database retrieval system
