Pimephales promelas (fathead minnow): 120489126
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Entry
120489126 CDS
T08155
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120489126 (si:ch211-106h11.1)
Ion channels [BR:
pprm04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
120489126 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
120489126
NCBI-ProteinID:
XP_039541711
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MFTLSELWSGGERQGSYKLLKPWWEVFMDYLLVLMLMVSILAGTLLLSRDGVVCVPVHSF
STNYSSTMEPMSDFVYTGAKQSLGSPAKGRRTNLDYQQYVYISQVCYHEALPWFSRFLPY
VTLLHTLVLLASGCFWFHFPLTSARIEHFLSLLAKCCESPWTTRALSHTAKLDTRFSEAE
QVTRPKVQVTSSYKTRKSSLDSGTDSPLLAGTDSASTTTQPSPCPSTLSHCSTLSARSLN
EPLLPAQVVPDGSRPGATLDRSDREQARALFERVRRFRAHCESSDVIFKVYTAQTVFKVL
KFVLIVSYTTPLLSSISFSHVCQLHSHALTGYSLFQCSHSLSSVLRKLMQAYISLLFLFG
LLGVYALFWIFHKSLRQYSFQSLREKGSMLDAPDLHNDMAFLLHMADQYDPLLSQRLSVF
LSPVSETRLLEESLERRWGAERLRSMITSDSQGQSLLQLVALPRLPPALFTLSQLQVLKL
ELIGDAKLTAQISNMTTLRELHLYHCTASVEPAALQHLQEHLETLHLTFTHASEIPAWVY
SLRGLQELHLSGRLSSEGGMGRGWALVSLRQLRHLRVLVLRGALQTIPGELSELAGSLVK
LEIYNEGTRLLVLTGLRRLAGLAEVQLNGCQLERLPSALLALTGLRILDLQHNSLRTLEE
LLGLQHLRRLSSLRLACNQILALPATVGVLRSLELLDLAHNQLRNLPSALFTLRKLRRLL
LAGNLLEVLPAEVGALTLLSELDLSANRLERLPKELFGSCIELRSLNVANNSLGSLPAGL
GGLTQLSHLDVRGNSLEELPVELGCCFGLRGGGFLAENWLMHTLPRQVRDVLQQTGSSEP
PSRPNSDCFPNFSTAQWSFHSALESRI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgctgtctgagctgtggtcgggcggtgagcgtcagggcagttataagcttctg
aagccgtggtgggaagtcttcatggactacctgctggtgctaatgctaatggtgtccatc
ctcgctgggactcttctgctgtcccgggacggagtcgtgtgcgtccctgttcactccttc
tccaccaactacagctctactatggagcccatgtcagatttcgtatacacaggtgcaaaa
cagtctctcgggagtccagcaaaggggcgacgtaccaacttggactaccaacagtatgtc
tacatcagccaggtttgctatcacgaggcgcttccctggttctcgcgctttctaccgtat
gtgacgctgctccacacgctggttctgctggctagcggctgcttctggttccacttcccg
ctcacgtccgctcgtatcgagcacttcctgtcgctcctcgccaaatgttgtgaatcacct
tggacaacaagagcgctttcgcacacggccaaactggatactcgcttttcggaggcagag
caagtaacgcgacccaaagtgcaggtaacatcatcgtacaaaacgcgaaagtcgagtttg
gactcgggaacggacagccctctgctggcgggaactgatagtgcatccactacgacacaa
ccgtctccatgtccctccactttatcccactgctccacgctttccgctcggtcgcttaac
gagccgcttctgccagcgcaagtcgtcccggacgggtctagaccgggagccacattggac
cgcagcgacagggagcaggccagagcgttgttcgagagagtgcgcaggtttcgcgctcac
tgcgagagttcagatgttatttttaaggtgtacactgctcagacggtgttcaaggtcctg
aagttcgtcctaatcgtgagctacactactcctctcctgagctccatctccttcagtcat
gtctgccagcttcactctcacgctctgaccggctacagcctcttccagtgcagtcattcg
ctgtcctccgtcctgcgcaagctgatgcaagcctacatctctctgctgtttctgttcggc
ctgctgggcgtctacgccctcttctggatcttccacaagtctttgaggcagtactcgttc
cagagtctacgtgagaaaggatccatgttagacgcacctgaccttcacaatgacatggca
ttccttttgcacatggccgaccagtacgaccctctgctgtcccagcgcctgtctgtgttc
ctttcgccggtcagcgagactcgcctactggaggagagtctagagcgacgctggggagcc
gagcgcttgcggtcgatgatcacaagtgactcacagggccaatctctgctgcagctcgtg
gctcttcctcgcctgccgccggccctcttcaccctcagccagttacaggtgttgaaactg
gagctgatcggagacgccaaactcacagcacagatatctaacatgaccacactcagggag
ctgcacctctaccactgcactgcctcagtggagcccgcagccctgcaacaccttcaggaa
cacctggagaccctgcacctcaccttcacccacgcctccgaaatcccggcctgggtctac
tccctccgcggcctgcaggagctgcacctgagtgggaggttgagcagcgagggcgggatg
gggcgcggctgggcccttgtgagcctccgacagctgcggcacctgcgagtcctggtgctg
cgcggcgcgctccagacaatcccgggggagctcagcgaattagccgggagtctggtaaaa
ctggagatatacaacgagggaactaggttgttggtgcttacgggactgaggcgtttagcc
ggattagcagaggtgcagctgaacggatgccagttggaaaggttgccttcagcactgcta
gcgctcacaggtctacgtattttggacctgcaacacaatagcctgcgtaccttagaggag
ctgttgggattgcagcatctgcgccgtttgtccagtctacgacttgcttgtaatcaaatc
ttggctcttccggctactgtaggagtgctgcgctcgctagagctcttggatttagcgcat
aaccagctgcgaaacttaccgtcggctctcttcacactacgcaaactgcgacgcctcctg
ctggccgggaatcttctggaagtgcttccggcggaggttggcgctctgacgctgctaagc
gaactggacctcagcgctaaccgactcgaacgccttcccaaggagctgtttggaagctgc
atagaacttcgcagcttgaacgttgcgaataactcgctgggatctttgccggcgggtcta
ggtgggttgactcagctgtcccatctggatgtgcggggcaacagtctggaggaacttccc
gtcgagctggggtgctgttttgggctccgtgggggcgggtttcttgcggaaaattggctg
atgcacaccttacctcggcaggtcagggacgtcctgcagcagactggctcttctgaacct
ccgtcacgacccaattcggattgctttcctaacttttcgactgcgcagtggagctttcac
tctgcactggaatctcggatataa
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