Pimephales promelas (fathead minnow): 120489220
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Entry
120489220 CDS
T08155
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04136
Autophagy - other
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120489220
04136 Autophagy - other
120489220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120489220
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120489220
Membrane trafficking [BR:
pprm04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120489220
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120489220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
EIF3I
BCAS3_WD40
RMC1_N
Beta-prop_Vps41
CNH
Motif
Other DBs
NCBI-GeneID:
120489220
NCBI-ProteinID:
XP_039541836
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
METEEGADGPGGPGPGPCCVSFNQDSTSLAVGTKTGYKLFSVTSVDKLDCIHESTETPEV
YIVERLFSSSLVVVVSQSMPRRMNVYHFKKGTEICNYSYSNNILAVRLNRQRLVVCLEES
IYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSFLAYPGSDTIGEIIVYDANNLSTVT
MIPAHDSPLAAITFSASGTKLASASERGTVIRVFSVPEGLRLFEFRRGMKRYVNISSLSF
SPDAQFLCASSNTETVHIFKLEQHSPSGEEEAPSWSTYVGKMFTAASSYLPAQVSGMMSQ
DRAFATSVSRWPVRRMSCTLAM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggagggagctgacggtcctggcgggccggggccggggccgtgctgcgtc
tccttcaaccaggactccacgtctttggctgtgggcaccaaaactggatacaaactattc
tctgtgacctctgtggacaaactggactgcattcatgagagtacagaaactccagaggtg
tatattgtggaaaggcttttctccagcagcctagttgtggtggtgagtcagtccatgcca
cgtcgcatgaatgtctaccacttcaaaaagggcacagagatttgcaactacagttactcg
aacaacattcttgcagtgcgtctcaacagacagagactggttgtctgtctggaggaatcc
atttatatccacaatataaaagacatgaaactcctgaaaacccttctcaacacaccatcc
aacccatcgggtctctgtgctctctccatcaaccattccaactctttcctggcatatcca
ggcagtgacaccatcggagaaattattgtctatgatgccaacaatctgagcactgtgacc
atgattccagctcatgacagtccactggccgccatcaccttcagtgcctcaggcaccaaa
ctggccagtgcttctgaaaggggtacagtgattcgagtcttctccgttccagagggactg
cgcttgtttgagttcaggcgggggatgaaaaggtatgtcaacatcagctccctttccttc
agcccggatgctcagttcctctgtgcctcaagcaatacagagacggtgcacattttcaag
cttgaacagcacagcccaagtggggaggaggaagctccctcttggtcaacatatgtaggt
aagatgttcacagcagccagtagctacctcccagcacaggtgtcaggcatgatgagtcaa
gaccgagctttcgcgacgtccgtctccagatggccggtcagaagaatgtcttgtaccctg
gcaatgtga
DBGET
integrated database retrieval system
