Pimephales promelas (fathead minnow): 120489423
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Entry
120489423 CDS
T08155
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120489423 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120489423 (lrrc4ba)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
NGL family
120489423 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120489423
NCBI-ProteinID:
XP_039542152
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MRITTVTSLPSPSPLLLLLVHLLLRLILPGQDAVGAASTCPTPCSCSNQASRVICTRRNL
EEVPDSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVESTGDEESALRAINETIIHIPGPT
PSGHLWDKVVPTTASSLSILGSSSSPRATKPTFTVPISEPNYPSGIDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGTGIRGSGISGGSTVP
QGGSGGQSLRLHHPEIVNLPNLARAEHLNHYYKAHHFNNNMMGLGLGGGSGGGLNNNNNP
PPCSQAQNIPISCTQVPVSAGSTSCSMPSSMPLPTLGIHGSLKGLMSKGQNPQIEPLLFK
SGSKENVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagccttcctagtccctcccccctcctcctcttattggtt
catctgctgttgcggctcatcctcccaggccaagacgcagtcggagccgcctccacctgt
cccacgccgtgcagttgttctaatcaagccagtcgagtgatctgtacaagacgaaactta
gaagaggtgccagacagtatatccaacaacacacgatacctcaacttacaggagaactcc
atacaggtgataaaatcagacacattcaaacatttgcggcacctggagatcctccagctc
tccaagaaccagattcgtcaaatagaggtgggtgctttcaatggcctcccaaacctcaac
actctggaactgttcgacaaccgcctcacactggtgccgtcgcaagcctttgagtacctc
agcaagctgcgagaattgtggttacgaaacaatccgattgagaccttaccaggctatgcc
tttcaccgcgtcccctcgctgcgacgtcttgacctaggcgaactcaaaaagctggattat
atatctgacgcagcctttgttggactcatcaacttgcgctacctgaacttgggtatgtgt
ggcctgaaagacatccctaatttgacccccctggtgcgactggaggagctagagttgtct
gggaaccgtctagaaattatcagacctggatccttccaaggcctggaatctttacgcaaa
ctatggctaatgcattctcagatgtcggtcatcgagcgcaatgctttcgatgatctcaag
aacctagaggagctcaacctatcccacaattccctacactctttgccccatgaccttttc
acacccttgcagaagctggagcgagtacatctcaatcacaacccttgggtgtgcaactgt
gacgtgctgtggttaagctggtggctgaaagaaactgtgccgagcaacacaacctgctgt
gcacggtgccatgcaccaccctacctaaagggaaagtacattggagagctggaccagagc
catttcacctgctatgcccccgtcattgtggagccgcccactgacctcaatgtgacagag
ggcatggctgctgagctcaagtgtcgcaccggtacctccatgacttctgtgaactggatc
acaccgaatggcaccctaatgacccatggctcctatcgggtcaggatttccgtgctgcat
gatggaacactgaatttcaccaatgtaactctgcgtgacactggccaatacacatgcatg
gtgaccaactcagctgggaacactacggcaactgctgtcctgaatgtgaccgcagcagac
gttagcgtcaactacacctacttcaccacggtcactgtagaaactgtggagagtacgggg
gacgaagaatctgcattgcgtgccatcaacgagaccattattcacattcctgggccgaca
ccatccgggcacctctgggataaagttgtccccactactgcctcttctctctcaatcctt
ggctcatcatcttctccccgcgcaaccaaacccactttcacagtccccatttctgagccc
aactacccctctggaatagacgatgtcatgaagaccaccaaaatcatcattggttgcttt
gtggcaattaccttcatggccgctgtcatgctggtggtgttctacaagctgcggaagcag
caccagttgcacaaacaccacgggccggcacgagccattgagatcattaacgtcgaagat
gaaatcggagcgggaacaggcatccgtggcagcggcatctcaggaggatccacagtaccg
caaggagggtccggcggacagagcttgcgactgcaccaccctgaaattgtcaacctccca
aaccttgcacgagcagagcatctcaaccattactacaaggcccatcacttcaacaataac
atgatgggtctgggccttggtggaggctcgggcggaggcctaaacaataacaacaacccc
ccgccctgctcccaggcccagaatatccccatctcttgcacgcaggtgccagtctctgca
ggtagtacatcatgttccatgccttcttcaatgcctctgccgacccttggcatccacggg
tcactgaaaggcctgatgagtaaagggcagaacccacagatcgagccgttacttttcaag
agcggctccaaggagaatgtccaagaaacccagatctga
DBGET
integrated database retrieval system
