Pimephales promelas (fathead minnow): 120489455
Help
Entry
120489455 CDS
T08155
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04120
Ubiquitin mediated proteolysis
pprm04137
Mitophagy - animal
pprm04144
Endocytosis
pprm04340
Hedgehog signaling pathway
pprm04350
TGF-beta signaling pathway
pprm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120489455 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120489455 (smurf1)
04350 TGF-beta signaling pathway
120489455 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120489455 (smurf1)
04137 Mitophagy - animal
120489455 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
120489455 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120489455 (smurf1)
04121 Ubiquitin system [BR:
pprm04121
]
120489455 (smurf1)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120489455 (smurf1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120489455 (smurf1)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120489455 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
120489455 (smurf1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
HECT type E3
120489455 (smurf1)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120489455 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
120489455
NCBI-ProteinID:
XP_039542213
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQMEVGIEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLSDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttcttccggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacggtcaaaagcacattggacccc
aagtggaatcagcattacgacttgtatattgggaagacagactcaatcaccattagtgta
tggaaccataagaagatccataagaagcaaggggcgggtttcttaggctgtgtccggctc
ctgtccaacgccatcagcagactaaaagacacgggctaccagcgtttagacttgtgcaag
ttgaacccatctgacagtgatgccgtgcgtggacaaatcgttgtgagcctgcaaaccaga
gaccgaattggcagtggagggcctgtggtcgactgtagaggactagtagagaatgaaggg
ccggtttttgaggattcggggcccgggcggcctctcagctgcttcatggaggagcccatg
ccatacacagatcccacaggggccgcaggcggaggtaactgccgtgcacttgagtcaccc
aatcaggagcaacgactccaagcacaacggatcagaaaccaagattcccgagggcacgca
cacacacctcaaaacagaccacacggacaccagtcccctgacctccctgagggctatgag
caacggaccactgtgcagggccaggtctattttctgcacacacagactggcgtgagcacc
tggcatgatcccagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccagcactct
caggtgaaggagtcgagccaagctctgcccgtacagatggaggttggtattgaggagggt
gacggggagttaccagtgcgctacgagagagatctggtccagaaacttaaagttctccgt
catgagctctccctgcagcagcctcaggccggccactgccgcatagaagtgtcccgtgag
gagatctttgaggagtcttatagacagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagtttagaggagaggaggggctggattacggtggtgttgctagggaa
tggttatatcttctctgccatgagatgctgaatccatactacggcctgtttcagtactca
actgataacatctacacactacagataaacccagattcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccacgggcactacatt
aatggaggcttcaccttgcccttctacaagcagctcctagggaagcccatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatcctagaaaatgac
atcacatctgttttggaccataccttctgcgtagaacataatgcttttggcaagttcctc
caacatgagctgaaaccaaacggcaagaacatcccagtcacagaggagaacaagaaagaa
tatgtgaggctatatgtcaactggaggttcatgcgaggcattgaggcccagttcctcgcc
ctgcagaagggcttcaacgaactcataccacagcatctactcaagccttttgacaacaag
gaacttgagctgatcattggtggtttggggaagatcgatctgagcgactggaaggccaac
acgcggctgaagcactgtgtggctgacagtaacatagtgaagtggttctggcaggcggtt
gaatcgtttgatgaggagaggagaggcagactgctacagttcgtcacgggctccacacgc
gtccctctacaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacttgcccaaagcccacacatgcttt
aaccgaatcgacatcccgccttacgagtcctacgagaagctctatgagaagctcctaacg
gccgtggaggagacgtgtggctttgcagtggagtga
DBGET
integrated database retrieval system
