Pimephales promelas (fathead minnow): 120489610 Help Entry 120489610         CDS       T08155                                  Symbol casc3 Name (RefSeq) protein CASC3 isoform X1   KO K14323   protein CASC3 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03013   Nucleocytoplasmic transport pprm03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     120489610 (casc3)    03015 mRNA surveillance pathway     120489610 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pprm03019]     120489610 (casc3) Messenger RNA biogenesis [BR:pprm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      120489610 (casc3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  120489610 NCBI-ProteinID:  XP_039542480 LinkDB All DBs Position Unknown AA seq 769 aa AA seqDB search MADRRRRRRRASQDSEEEDESASGSESGRSSSASRKPRGRDPEPVEVPVERVATKRDDES ECESEDGVGEAVLSDYDSADLEENGSHTEGGEDEEEGEHFSDDEASRPAAEPKPAADAPT EELVEAEEREKVVKEVKTDEKENLAGERQSGDGQESTEDPENKSGSKGQKLDDDEDRKNP AYIPRKGLFFEHDVRGQATEEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREELIALY GYDIRNGAGQSDGRSYRSRKPRYSGSPSREPRRHRDGEKSLRTTWQGPPPGHRNSPQSVT LQSGPPPAPPAAPKPSGRPSTQPPQRSFQGSRPSSAPHRTEGRGYPKPSLDGPPPRGVRP QPGEGERGPRLRGRGSHAVHPDRSPAVVVEDIRSEEEEEEGEIPTATTTYTAHHYKTERE RVPSPRKQDPGQVMDGGNAAGQVRESSPPQERPVEKKSYSLGRRATRTRPSDLSKQASLD DSSPTVQQTPAKSESWQEQSEAGTQGGLTGLDQDLARLSLGGQNWAQSPPSYLQAEMRGI RGSMHMAGGPPQYGNMEDLGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEPMSFQG TIYTHGDSPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHPSGGPIPNPALYAAPPVSMSP GQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQVYGGVTYYDTMQQ QAQPKRSPPRRSSHPVTVRPPPPEVTAYYIQQGELNQDQSRNPAEEIHS NT seq 2310 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag tccgcctcgggctccgagagcgggagatcttcctcggccagccggaagcctcgcggaaga gatcccgagcctgtcgaagtgccagtggagcgcgtcgccactaaaagagacgatgagtcg gagtgtgaaagtgaagatggcgttggtgaagcagtgctatcagactatgacagtgctgat ctggaggagaatggatcgcacacggagggaggagaggatgaggaggaaggagagcatttt agtgacgacgaagcctcacgtcctgctgcagaaccaaagcccgctgctgatgctccgaca gaagagcttgttgaagcggaagagagagagaaagttgtcaaggaagttaaaacagatgag aaggagaatctagccggggagcgacagagtggggatggacaggaaagcacagaggaccct gagaataaatcaggaagtaaaggccagaagctggatgatgatgaggaccggaagaatcca gcttacatcccccgaaaaggccttttctttgagcatgatgtgagaggccaggctaccgag gaggagaggcctaaaggcagacacaggaagttgtggaaggatgagggccgatgggaacac gacaagttccgtgaagaggagcaggcgccaaaatcccgcgaagagcttatcgctctttat ggttatgacatccgcaacggcgcagggcagagtgatggacgatcgtaccgctcccgaaaa cccagatattctggttcacccagtcgggagcctaggcgccaccgtgacggagagaagtct ttgcgtacaacatggcaggggcctccacctggccaccgcaatagccctcaatctgttacc ctacagtcaggtccacctcctgctccccctgcagcacccaaaccctctgggcgaccctcg actcaacctccgcagcgcagcttccagggcagtcgaccctcgtccgccccccataggaca gaaggtcgaggatacccaaagcctagtctagacggcccgccacctcgaggtgtgcggcca cagcctggggagggtgaaaggggtccgaggctcagaggccgtggctcacatgctgttcat cctgaccgtagcccagccgtggtggtggaggacatccgcagtgaggaagaggaagaagag ggtgagattccaacagccacgactacatacaccgctcaccactacaagacggagagagaa agggttccgtcaccacgaaagcaagatccaggccaagtgatggacgggggcaatgcagcc ggtcaggtgcgagaatcgtctccacctcaggagaggccggtggagaagaaatcgtactct ctcgggcggagggctacgcgaactcgaccgtctgatctcagtaagcaggcgtcgttggat gactcttcgcccacggtccagcaaaccccagcgaagagcgagtcgtggcaagagcaaagt gaagcaggaacacaaggtggattaacagggctcgaccaggacctggcccgccttagtctg ggagggcagaactgggcccagagcccaccctcatacctgcaggctgagatgagaggcatc cgtggatccatgcacatggcaggaggccctccacagtacggaaacatggaggatctaggt gttggtggtggccgggctaagcggtattcatcacagcgccagaggccagttcctgagcct gcgcccatgcacataggagtcatggagggccattattatgaacctatgtctttccaggga acaatttatacgcatggggacagtccagcagccctgccccctcaaggcatgcttgttcaa cctgaaatgcacctgccacaccccacccaccccggacacccaggcttgcatccgcacccg tcgggagggcccattcccaacccagctctttatgctgccccacccgtttctatgtcacct gggcaaccgcctccacagcagctgctacccccacccttctaccctccaccaggtgtcatg acctttgggaacaccaactacccgtacccagccggagctacgctacctccaatgtacccc aacccccaggcacagtcacaggtctacggtggtgtgacgtactacgacacgatgcagcag caagctcaacccaaacgttccccgccgcgacgttcctctcatcctgttacagtcagacct ccccctcctgaggtaacagcatattacattcagcaaggagagctcaatcaggaccagagc agaaatcccgctgaggaaatccactcctag

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