Pimephales promelas (fathead minnow): 120489617
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Entry
120489617 CDS
T08155
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120489617 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120489617 (gspt1l)
03012 Translation factors [BR:
pprm03012
]
120489617 (gspt1l)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120489617 (gspt1l)
Translation factors [BR:
pprm03012
]
Eukaryotic type
Release factors
120489617 (gspt1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120489617
NCBI-ProteinID:
XP_039542500
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MEAIDTAPDSWDQEDDGEAQVDVQLSNALTTTLNVDAKPFVPNVHAAEFIPTFLPKGSTE
TVESAGLDTDANLEVSEPEAPPMENGDAEMTTDDTWEQKGSEPSEAEAEPGGPGGEEGQA
EEDSPQEEGMEEEEVPTPKVAPTQPNAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
KRTLEKYEKEAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKM
DDPTVNWSLERYEECKEKLVPFLKKVGFNPRKDIHFMPCSGLTGANLKEPADYCPWYTGL
PFIPHLDSLPNFNRSSGGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVE
VLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNAENLCHTGRTFDAQIVIIEH
KSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTAGT
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgatagacactgcccctgattcctgggatcaggaggacgatggcgaggcccag
gtcgacgtgcaactttccaatgctcttactaccacccttaacgtggacgccaagccgttt
gtccccaacgtgcatgccgcagaattcatcccgaccttcctgccgaagggttccacggaa
actgtggagtcagcgggtcttgatacggatgccaatttggaagtatcagagcctgaggct
ccacccatggagaacggtgatgcagagatgacaacagatgacacctgggagcagaaaggg
agtgagcccagtgaggctgaagcagagccaggaggccctggaggagaggagggtcaagct
gaagaagactcccctcaagaggaaggaatggaggaagaagaagtgccaacacctaaagta
gcccccacacagccaaatgcccccaagaaggaacatgttaacgtggtctttattgggcat
gtcgatgctgggaagtcaactattggaggacaaattatgtatttaacaggtatggtcgac
aaacgaactctggagaagtatgaaaaagaagccaaggagaagaacagggaaacttggtac
ctctcttgggctcttgacacaaaccaggaggaaagagacaaaggaaagactgtggaagtt
ggacgtgcatacttcgaaaccgagaaaaagcattttaccattctggatgcaccaggccac
aaaagctttgtgcccaacatgattggtggtgcttcacaggctgatttggcagtgctggta
atctctgcaaggaaaggagagtttgaaacaggctttgagaaaggaggccagacacgagag
catgccatgttggccaaaactgctggagtaaagcatttgattgtacttgtcaacaaaatg
gatgacccaacagttaactggagtctggagaggtacgaagaatgtaaggagaaacttgtt
ccatttttgaagaaagttgggtttaaccccaggaaagatattcattttatgccatgttcg
ggacttactggggccaacctaaaggagccggcggattactgcccttggtatacagggtta
ccattcattccacatctggacagtttgccaaacttcaacagatcaagtggtggaccagtc
aggttacccattgtagacaaatacaaggacatgggcactgtaatattggggaaattggag
tcgggatcaatcagtaaagctcagcaacttgttatgatgcccaacaggcacactgtggag
gtgctgagtctgctttctgatgacgtcgaaaccgatgatgccggaccaggagagaacttg
aagttgcgactcaaaggcattgaagaggaggagatcctgccgggcttcatcctctgcaat
gctgagaacctttgccatactgggcgcacctttgatgcccagatagtcatcattgaacac
aagtcaatcatctgcccaggttacaatgcggttcttcatatccacacctgcattgaagaa
gtgcaaatttcggccttaatttgtctggtagacaaaaagactggggacaagagcaaaaca
cgaccccgcttcgtcaagcaggaccaagtgtgcattgctcgtttgagaacagctggtacc
atctgccttgagaccttcaaagatttccctcagatgggacgcttcaccttacgagatgaa
gggaaaaccattgccattggaaaagtgttaaaacttgttgcagagaaggactga
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