Pimephales promelas (fathead minnow): 120489653
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Entry
120489653 CDS
T08155
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04142
Lysosome
pprm04144
Endocytosis
pprm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120489653 (cltcl1)
04142 Lysosome
120489653 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120489653 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120489653 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120489653 (cltcl1)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120489653 (cltcl1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Proteins found in most exosomes
120489653 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
TPR_PEP5_VPS11
TPR_COPA_B
HEAT_Nup120
TPR_Vps8
Motif
Other DBs
NCBI-GeneID:
120489653
NCBI-ProteinID:
XP_039542561
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQSLGVSPAGISFSCLTMESDRFICIREKVGEQNQVIIIDLSDPTN
PIRRPITADSAIMNPASRVIALKDAERTLQIFNMEMKSKVKAHTMTDEVLFWKWISVNTI
ALVTDTAVYHWSMEGDSQPIKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVIG
AMQLFSVDRKVSQPIEGHAAAFGLYKLEGNSNASTLFCFAVRGQAGGKLHIIEVGQPQTG
NQPFTKKAVDVFFPPEAQTDFPVAMQIGLKHGVIYLVTKYGYFHMYDLESGVCIYMNRIS
AETIFVTAGHESTSGIIGVNKKGQVLSVCVEEENIVNYVTSVLQNPELALRMALRSDLPG
AEELLTHKFNTLFSQGSYTEAAKVAASAPKGVLRTADTIRRFQAVPAQGTQASPLLQYFG
VLLDRGQLNKLESVELCRPVLQQGRKQLLEKWLKGEKLECSEELGDLVKAADITLALSVY
LRANVPAKVIQCFAETGQFQKIVLYAKKMGYSPDWVMLLRTVMRSGPDQGLQFAQMLVQD
EEPLVNISQVVDVFMEAPLVQQCTSFLLDALKSNRPEEGPLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDPYDIKRTIVHTHLLNPEWLLNFFGSLS
VGDSVECLRAMLAANLRQNLQLSVQVATKYHEQLGTQTLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDTIKSLILAVRGD
FSTDQLVEEVEKRNRLKLLLSWLESRVQDGCEEPATHNALMKIYIDSNNSPERFLRENLH
YDSANVGRYCEKRDPHLAFVCYERGQCDRELIQVCNENSLFKSESRYLVRRKDPDLWAEV
LQESNPYRRPLIDQVVQTALPETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSIFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFSIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCGEGSVWSQLAQAQLQRDLVKEAIDSYIKAGEPAAYME
VVQAASKNGNWEDLVKFLQMARSKARESYVETELIFALAKTNRLTELEDFINGPNNAHIQ
QVGERCYEDCMFEAARLLFNNVSNFARLASTLVHLGEFQAAVDSARKASCTRTWKEVCFA
CVDGEEFRLAQISGLHIVTHADELEELINYYQDRGYFEELIVLLEAALGLERAHMGMFTE
LAILYSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVLLYDKYEEFDNAILTMM
KHPTDAWRDASFKELISKVANVELYYKSLQFYLDYKPLLLNDLLSVLTPRLDHSRAVSFF
SRVNQLRLVKPYLRSVQRNNNRAVNEALNALLTEEEDYQGLRASIDAYDSFDSIALAQRL
ETHELIEFRRIAAYLYKSNQRWAQSIQLCKKDKLYKDAMQFAAESQDGAQAQDLLRWFVE
EGKRECFAACLFSSYDLLAPDVVLELAWKHGLVDFAMPYFIQVMREYLSKVDELSGLVKV
DKLQEDENKRASEDETPESSAIVYGQQLMLNGGQTAVTPQPGFPSYGYAPPVYGFNLQP
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattttacccatccgctttcaggagcatctgcagctgcagtctctgggcgtg
agtccggccgggatcagcttcagttgcctgaccatggagtcggaccgcttcatctgcatc
cgggagaaggtgggcgagcagaaccaggtgatcatcatcgacctgagcgacccgaccaac
cccatccgccggcccatcacagccgacagcgccatcatgaacccggccagcagggtcatc
gccctcaaagatgcggagcgaacgcttcagatcttcaacatggagatgaagagtaaagtg
aaggctcacaccatgacggatgaagtcctgttctggaagtggatctccgtcaacaccatc
gccctggttacggacacggccgtctatcattggagcatggagggagactctcagccaatc
aagatgttcgaccggcacgccagtctcgctggatgtcagatcataaactacagaaccgac
gagcagcagaagtggctcctgctcatcgggatatcagcgcagcagaaccgggtgatcggt
gcgatgcagttgttctccgtggaccggaaggtttctcagcccatcgagggtcacgccgcg
gcgtttggactttataaactggagggaaactcaaacgcctcaacgctcttctgcttcgct
gtcagaggacaggctggaggaaagctgcacatcatcgaggtcggccagcctcagactggg
aaccagccgttcactaagaaagcggtggatgtgtttttccctcctgaagcacagacagac
tttcctgtagccatgcagatcggtctgaagcacggcgtcatctacctcgtcactaaatac
ggctactttcacatgtatgatctggagtcgggtgtgtgtatatacatgaaccgcatcagc
gctgaaactatattcgtcacggcgggtcatgagagcacgtctgggatcatcggggttaat
aagaaggggcaggtcctgtcggtgtgtgttgaggaggagaacattgtaaattacgtgact
agtgtgctccagaatcccgagctggcgttacggatggcgttacgcagtgatcttcccgga
gccgaggagctgttgacacacaagttcaacacactcttctcacagggcagctacacggag
gcggccaaagtcgctgcgtcggctcccaagggtgtcttgcgtacggcggacaccatccgc
aggttccaggcggtgccggctcagggcacgcaggcgtctccgttactgcagtatttcggg
gttctgctggaccgcgggcagctcaataagctggagtcggtggagctctgcaggccggtg
ctgcaacagggacgcaaacagctcctcgagaagtggctcaagggagagaagctggagtgc
tcggaggagttgggtgatctggtgaaggccgctgacatcactctggccctcagcgtttat
ctccgcgcgaatgttcctgctaaagtcattcagtgctttgctgagaccggtcaattccag
aagatagttctctatgctaagaagatgggatattctccagactgggtgatgttgttgagg
actgtgatgagatccggaccggatcaggggcttcagtttgctcagatgctggtccaggat
gaagaaccgctggtcaacatcagccaggtggttgatgtcttcatggaggctccgctagtg
cagcagtgtacttcattcctattggacgctctgaagagcaaccggccggaggaggggcct
cttcagacacgcctcctggagatgaacctcatccacgcccctcaggtcgcagatgcgatc
ctgggtaatcagatgttcacacactacgaccgcgctcacatcgctcagctgtgtgagaaa
gccggtttactgcagagggcgctggagcattacaccgacccctacgacatcaaacgaacc
atcgtacacacacacctgctcaacccagagtggttgttgaatttcttcggctctctgtct
gtcggcgactcagtggagtgtttgcgagcgatgctggcggcaaacctgcggcagaacctg
cagttgagcgttcaggtcgcgaccaagtaccacgagcagctgggcacgcaaacactggtg
gagctgttcgagtcctttaagagttacgagggcctgttttattttctgggatctatcgtg
aacttcagtcaagacccagatgtgcatttcaaatacatccaggcggcgtgtaagacgggc
cagatcaaagaggtggagcgcatctgtcgagagagcaactgctacgacgccgagcgcgtc
aagaacttcctcaaggaagccaagctcaccgatcagcttcctctcatcatcgtgtgcgac
cgcttcgacttcgtccacgatctggttctgtacctgtaccgcaacagcctgcagaaatac
atcgagatctacgtgcagaaggtgaaccccagccggctgccggtggtggtcgggggtctg
ctggacgtcgactgctccgaggacaccattaagagtctgatcctggccgtacgaggagat
ttcagcaccgaccagctggtggaggaagtggagaaaagaaaccgcctgaagctgctcttg
tcctggctggaatctcgagttcaggatggctgtgaagaacctgctacccacaatgccttg
atgaagatctacatagacagtaacaacagtcctgagcgcttcctccgagagaacctgcac
tacgacagcgccaacgtgggccgatactgcgagaagagggatccgcacctggccttcgtg
tgctatgagagaggacagtgtgaccgggagctcatacaggtgtgcaatgagaactcgttg
tttaagagcgagtctcggtacctggtgcgccggaaagacccggatctgtgggctgaggtt
ttgcaggagtcaaacccctacagacggccactgatcgaccaggtggttcagacggctctg
ccggagacgcaggatcccgaggaagtgtctgtgacggtgaaggcgttcatgacggcggat
ttgcccaacgagctcatcgaactcctggagaagatcgttctggacaactccatatttagc
gagcacagaaacctgcagaacctgctgatactgacggccattaaagcggaccgcacgcgg
gtcatggagtacatcaaccgcctggacaactacgacgctcctgacatcgctaacatcgcc
atcagcaacgagctgtacgaagaggccttctccatctttaagaagtttgacgtcaacacc
tcagcgatacaagttctgatcgagcacattgggaatctggaccgggcgtatgagtttgcg
gagcggtgtggggagggttcggtgtggagtcagctcgctcaggctcagcttcagagagat
ctggttaaagaagccatcgactcgtacatcaaagctggagaaccggcggcgtacatggag
gtggtgcaggccgccagtaagaacggtaactgggaggatctggtgaagtttcttcaaatg
gcgagaagtaaagccagagagtcttacgtcgagacggagctcatctttgcgctggctaaa
acaaaccgtctcactgaactggaggacttcatcaacgggccaaacaacgctcacatacag
caggttggcgagaggtgttatgaagactgcatgtttgaagccgcccgtctgctctttaat
aacgtgtctaatttcgctcgtctggcgtctacgctcgttcacctcggagagtttcaggcg
gccgtcgacagcgcacgcaaggccagctgcactcgcacctggaaagaggtgtgttttgcg
tgtgtggatggagaggagttccggttagcgcagatctccggccttcacatcgtcactcat
gctgacgaactggaggaactcattaactactatcaggatcgtgggtatttcgaggagctg
atcgtgctgttggaggcggcgttgggcttggagcgcgctcacatgggcatgttcactgag
ctggccatcctctactccaagtacaaaccccagaggatgagggaacatctggagctcttc
tggtctcgagtcaacatccccaaggtgttgcgagcggctgaacaggctcatctgtgggcg
gagcttgtgctcctgtacgataaatacgaggagtttgacaatgccatcctgacgatgatg
aaacacccgacagacgcctggagagacgcgtccttcaaagagctcatcagcaaggtggcg
aatgtggagctgtattataaatctctgcagttttatctggactataaaccgcttctgctc
aatgatctgctgtctgtgctcactcctcgactggaccacagccgagccgtcagcttcttc
agcagggtgaaccagttacgactggttaaaccgtatctcagatcagtgcaaaggaacaac
aaccgcgccgtgaacgaagcgctcaacgccctgctgacggaggaggaggactatcagggt
ctgcgcgcctccatcgacgcgtacgacagcttcgactccatcgctttggctcagagactg
gagacgcacgagctcatcgagttcagacgcatcgctgcgtatctgtacaagagcaaccag
cgctgggctcaaagcattcagctctgcaagaaagacaagctttacaaggatgcgatgcag
ttcgcggccgagtctcaggacggcgctcaggctcaggatctcttgcgctggtttgtggaa
gagggaaagcgtgagtgtttcgctgcgtgtctcttcagctcgtatgatcttctggctcct
gacgtggtcctggaactggcctggaaacacggactcgtggacttcgccatgccttacttc
attcaggtgatgagggagtacctgagcaaggtggatgaattatccggactggtgaaggtg
gataaactgcaggaggacgagaacaagagagcgtctgaagacgagactcccgaatcctcc
gccatagtctacgggcaacagctgatgctgaacggcggtcagacagcagtcacaccccag
ccgggtttcccgagctacggatacgctcctcctgtgtacggcttcaaccttcagccttaa
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integrated database retrieval system
