KEGG   Pimephales promelas (fathead minnow): 120489776
Entry
120489776         CDS       T08155                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120489776 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120489776 (thoc6)
   03041 Spliceosome [BR:pprm03041]
    120489776 (thoc6)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     120489776 (thoc6)
Spliceosome [BR:pprm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    120489776 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz WDR55 Beta-prop_EML_2 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR54 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_IP5PC_F EIF3I Beta-prop_IFT140_1st WD40_like Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 120489776
NCBI-ProteinID: XP_039542809
LinkDB
Position
Unknown
AA seq 328 aa
MNSRKMGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDASEGSQKPFLN
FTAHDGPVFSLLSTDTHLLSAGNGEISAWSWAELIKKSTKAAWTRKPNYETSLEIPEINA
MIINPKDNGLIVGGGDNNIHIMDMETGVFKSVLKGHTDYIHCLCFKEREGEILSGGEDGA
VRIWDSRTNRPVHCIEVFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSP
TSVFPLPGCQREAVFYQDMIMSVGEGPNVSHCLHGGTVKAQIPCSPSSLNTLALNLKNIE
HRVMTVGGSSHQIDVFTNFSYRAFSLSF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaactcccggaagatgggtccagttgaactcctccatatgtccgtgttctcgcagagt
ttctctccctgcggtcgtttccttgcagcgggcaataactatggagagatcgcagtgttc
agtctctcggctgcgctgagtccagatgcttcagaggggagtcagaagcccttcctaaac
ttcactgctcatgacggtccagtgttctctctactctccacggacactcatcttctgagt
gctgggaatggcgagatcagtgcctggagttgggcagagctcatcaaaaaaagcaccaaa
gctgcatggacgaggaaacccaattatgagactagtcttgaaattccagagatcaatgcg
atgatcattaacccgaaggacaacggcttgatagttggaggcggcgacaataacattcac
atcatggacatggagacaggcgtctttaagtctgtactgaagggccacactgactacatc
cactgcctgtgctttaaagaaagggaaggggagatactctctggtggagaagatggtgct
gtgaggatatgggactcaagaacaaatcggccagttcactgtattgaagttttcaaatat
gaggaatgcgcacgcccccagtttgggaagtggattagctgtcttgctacagactctgat
tggatgctctgtggtggaggcccatcactctctttatggcacctccgatccatgtccccc
acctctgtcttccctttgcctggatgtcaaagagaagctgtcttttaccaggacatgatc
atgtcagttggtgagggtccaaatgtgtcccactgtttacatggaggtacagtgaaagct
cagattccctgctctccttcatcactcaacacactggctctcaatctcaaaaacattgaa
catagggttatgacagtagggggcagcagtcaccaaattgatgtgttcaccaacttcagt
tacagagccttttctctgtcattctga

DBGET integrated database retrieval system