Pimephales promelas (fathead minnow): 120489901
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Entry
120489901 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120489901
04121 Ubiquitin system [BR:
pprm04121
]
120489901
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120489901
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120489901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
120489901
NCBI-ProteinID:
XP_039543065
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MWSSRTMEPYMSLTVHYIDDNYEIKSRCLQTAYFPENHTGENIAQGLKEALASWGLCEDQ
QVSITTDNGSNIVKAVTLNNWTRLQCFGHRLHLAIENAIKDERISRANGLCKKIVGHFSH
SWKKKMMLAEAQEELQLPQHALITSCPTRWGSMQQMIDRVLEQQKALSQVLSADRKTRHL
VPQWQDTDVLESVSKALGPLQEFTDALSSENYISVSYVKPVLHLLNTKILAVKDEDTDLT
KTIKSKILNYINKHYEDETTQELLDIATFLDPRFKTNYTDEDKLPNIKARVMSDMDMSSH
KDTYEPGSSTSRENPDIDLPPPGKKARKSLGSFFKTTSAMPAALQLEEAIASELNSYLLS
PSIDSEEDPLKWWRLHQINFPRMSRVAQKYLCIPATSSPSERVFSTGGNVVTCHRSCLKP
EMVDMLVFLAKNL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccagcagaacgatggagccgtacatgagtttaacggtccattatatcgatgac
aactatgaaataaaaagtcgatgcttgcaaacagcatattttccagaaaatcacactgga
gaaaatatcgctcaaggtttaaaagaagctttagcatcatggggactttgtgaagatcaa
caagtgtctatcaccacagacaatggatccaatatagtgaaggctgtcactttgaacaac
tggacacgactgcagtgcttcgggcacagactacatttggcaattgaaaatgcaatcaag
gatgaacgcatttccagagccaacggcttatgcaaaaagattgtgggacatttttcccac
agttggaaaaaaaagatgatgttagccgaagcccaggaagaacttcagcttccccaacat
gccctcattacatcatgcccgacaagatggggctcaatgcaacaaatgatagacagggtt
ttggagcaacagaaggcattgtctcaggtcctttcagctgaccgtaaaacaagacaccta
gtaccacagtggcaagacacagatgttctagaatctgtgagtaaggcactgggtccactt
caggagttcacggatgccctttccagtgaaaactacatcagtgtatcctacgtgaaacca
gttcttcatctgttgaacaccaagatacttgcagtgaaggatgaagatactgacctgaca
aagactataaaatcaaaaattcttaactacatcaacaaacattatgaggatgaaactacc
caagagcttctggacatagcaacatttttggatccaagattcaaaaccaactacactgat
gaggacaaacttccaaacattaaggccagggtcatgtctgatatggatatgagttcccac
aaggatacatatgaacctgggagtagcacaagcagagagaatcctgacatcgatctacct
ccaccaggcaaaaaagcaaggaagtccttgggaagcttctttaaaacgacatcagccatg
ccagcagctctgcaacttgaagaagccattgcctctgagctaaatagctacctgctttct
ccatccattgacagtgaggaagatcctttgaaatggtggagactccatcagataaatttc
ccaagaatgagcagggttgcacaaaagtatctttgtattcctgccaccagctcaccttca
gagagagtgtttagtactgggggaaatgtggtgacatgtcaccgttcatgcttaaaacca
gaaatggtagacatgctggttttccttgcaaaaaacctttaa
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