Pimephales promelas (fathead minnow): 120490015
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Entry
120490015 CDS
T08155
Symbol
cacng1b
Name
(RefSeq) voltage-dependent calcium channel gamma-1 subunit isoform X1
KO
K04866
voltage-dependent calcium channel gamma-1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04260
Cardiac muscle contraction
pprm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120490015 (cacng1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120490015 (cacng1b)
04261 Adrenergic signaling in cardiomyocytes
120490015 (cacng1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120490015 (cacng1b)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120490015 (cacng1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
PRRSV_Env
DUF2975
Motif
Other DBs
NCBI-GeneID:
120490015
NCBI-ProteinID:
XP_039543259
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MLEDQKTKVKITFLVILVGISSMLAAVVTDHWAVLSPRVEQLNTTCEAAHFGLWRLCKKS
IFIVEEDPEGKGCGPISLPGVKNCSYFKHFTSGEEAEVFEVKTQKEYNISAAAIAIFSLA
FMTLGSLCLLGAFGKGRDYLLRPAGMFFAFAGLCIVISVEVMRQSVKRMIDSDETIWIEY
YYSWSFACACAAFTLLFLSGLSLLIISMPHMPRNPWETCMDADPDSID
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgctagaggaccagaagaccaaggtgaagatcaccttcctggttatcctggtgggcatc
tcgtccatgttggcggcagtggtgacggaccattgggcggttctgagtcccagggtggag
cagctcaacaccacctgcgaagcggcccactttggactctggagactgtgtaaaaagagt
atcttcattgtggaggaagaccctgagggcaaaggctgtggccctatcagcctgccagga
gtcaagaactgctcatacttcaaacacttcacatcaggggaagaggctgaagtttttgaa
gtaaagactcagaaagagtacaacatctcagctgctgccatcgccatcttcagtctggcc
ttcatgacgctgggcagtctctgcctcctgggggcttttgggaagggtagagactaccta
ctgagaccagctggcatgttctttgcttttgcaggcctgtgtatcgtcatctccgtggag
gtcatgaggcagtcggtcaaacgcatgatcgacagcgacgagaccatatggatcgagtac
tactattcatggtccttcgcttgcgcctgcgccgccttcaccctcctcttcctcagtggc
ctcagcctcctcatcatctccatgccacacatgcccagaaacccctgggagacctgcatg
gacgccgacccggattccatagactag
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