Pimephales promelas (fathead minnow): 120490018
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Entry
120490018 CDS
T08155
Symbol
appb
Name
(RefSeq) amyloid beta (A4) precursor protein b isoform X1
KO
K04520
amyloid beta A4 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120490018 (appb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120490018 (appb)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120490018 (appb)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120490018 (appb)
Peptidases and inhibitors [BR:
pprm01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120490018 (appb)
Proteoglycans [BR:
pprm00535
]
Cell surface proteoglycans
Others
120490018 (appb)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Others
120490018 (appb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Kunitz_BPTI
Beta-APP
eIF-3c_N
HrpE
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120490018
NCBI-ProteinID:
XP_039543265
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MDMDRTVFLLSILTTLSLAIEVPSDDSVGLLAEPQVAMFCGKLNMHINVQSGKWETDPTG
TKSCIGTKEGILQYCQEVYPDLQITNVVEANQPIGIKDWCKMGRRLCRSHTHIVVPYRCL
VGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDR
FRGVEFVCCPMEEHKELDSEEQEEANSDVWWGGAEAEYTDSSVPREQTPTKPEPAVTEDD
EDINNEEEEVWDNDEDGDGEDDEDEEDDDEDTTDEQDTSEQTSNIAMTTTTTTTTESIEE
VVRAVCWAPPRMGPCHDKLPRWYFVVETGRCAPFIFGGCGGNRNNFESEEYCMAVCSSSV
LPTMAPSPADAVDRYLEAPGDVNEHTRFQKAKESLEAKHREKMSEVMREWEEAERQAKNL
PRADKKTIIQRFQEKVEALEKEAAGERQQLVETHMARVEALLNDRRRQALESYLSALQSD
QPRPRQVLSLLKKYIRAEQKDRQHTLKHFEHVREVDPKKASQIRPFVMTHLRVIEERINQ
SLGYLYKVPQVANEIQDQVALLVQRDQAEVTQLLSSLQSKMRVSYGNDALMPDLPDSTAT
LDILPPEQDGLGFIHPESFNQANTDNHVEPVDARPIPDRGLPTRPEIPKVRLDIEERHNA
GYDVRDKRLMFLAEDMGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVD
AAVTPEERHLTKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaccgtacggtattcctgctgtcaatactgacgactttgtcgctcgccatc
gaggtgccatcagatgactcagtgggcttgttggcggagccccaggtggccatgttctgt
ggaaaactcaacatgcatatcaacgtccagagtggcaagtgggagacggatccaactggc
accaagagctgcatcggcaccaaagagggcatccttcagtactgccaagaggtataccca
gacctccagatcactaacgtagtggaggccaaccagcccatcggcatcaaggactggtgc
aaaatgggtcgccgcctgtgccgcagtcacacgcacattgttgtcccctaccgctgcttg
gttggggagtttgtaagcgacgcccttctggtcccagacaagtgcaagttcctgcaccag
gagcgaatggacatgtgcgagagtcatctgcattggcacacggtggccaaagagtcctgc
ggtgatcgttccatgaatctccatgactacggcatgctgctgccatgcggcatcgaccgt
ttccgtggtgtagagtttgtgtgctgccccatggaggagcacaaggagttagacagcgag
gagcaggaagaggccaactcagatgtgtggtggggcggcgcagaggccgagtataccgac
agcagtgtaccgagagagcagaccccgaccaaacctgagcccgctgtgactgaggacgat
gaggatatcaacaatgaggaagaggaagtatgggacaacgatgaagatggtgacggtgaa
gatgatgaagacgaggaagatgacgatgaagacacaaccgacgaacaagacaccagcgag
cagacctccaacattgcaatgacaaccaccaccactaccacaacggagtctatagaggag
gttgtgcgagcggtgtgctgggcccctcctcggatggggccatgccatgacaagcttccc
cgctggtattttgtggtggagacgggccgatgcgcccccttcatctttgggggctgtggg
ggaaaccgcaataactttgaatcagaggagtactgcatggctgtctgcagcagcagtgtg
ttgccaaccatggccccgagccctgctgatgctgtggatcgttacctggaagctccagga
gatgtgaatgagcacacccgcttccagaaagcaaaggagagcctggaggccaaacacaga
gagaaaatgtcagaggtaatgagagaatgggaggaggcagagagacaggcaaagaatctt
cctcgtgctgataagaagaccataattcagcgctttcaggagaaggtggaggcgttggag
aaagaggcggccggggagagacagcagctggtagaaacccacatggcacgagtggaagct
ctgctgaacgaccgacgccgccaggctctggagagctaccttagcgcgcttcagtcggac
cagcctcggcctcggcaggttctcagtctgttgaagaagtacatacgagcggagcagaaa
gacaggcagcacaccctcaaacactttgagcacgtgcgggaggtggatcccaagaaggcg
tcccagattcgaccatttgtgatgacccacctgcgtgttattgaggaacgcattaaccaa
tccttggggtacctctacaaggtgccacaagtggctaatgaaatccaggaccaagtggca
ctgctggttcagcgtgaccaggcggaagtcacccaactgctgtcatctctccagagtaag
atgagggttagctacgggaacgacgccctgatgccggacctgcctgacagcaccgccacc
ctggacatcctgccaccggagcaggacggcctgggcttcatccaccccgaaagcttcaac
caggccaacaccgacaaccatgttgaacccgtagatgcccgtccaattccagataggggt
ctgcctacgagacccgagattccaaaggttcggctggatattgaggaaaggcacaacgct
ggttatgatgttcgtgacaagagactgatgttccttgcagaagacatgggctctaataaa
ggggcaatcattggactgatggtgggtggagttgtcattgctacagtcattgtaatcacc
cttgttatgctaaggaagaagcagtacacttccattcaccatggagttattgaggttgac
gcagcggtgacccctgaggaacgccatcttactaagatgcagcagaacggctacgagaac
cccacctacaagttcttcgagcagatgcagaactaa
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integrated database retrieval system
