Pimephales promelas (fathead minnow): 120490091
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Entry
120490091 CDS
T08155
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120490091 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120490091 (grin2ca)
04082 Neuroactive ligand signaling
120490091 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120490091 (grin2ca)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Glutamate (ionotropic)
120490091 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120490091
NCBI-ProteinID:
XP_039543407
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVFSAPRCQCRPFGMVEPTVNVAVVFSGSAYQLEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKMMEEYNWDSFVVVTSM
YPGYNNYVDYIRSFIDTSYFLWELQDILTFDMSADGMNDLRAHRLLQQIDAQVLLVYCSH
DEAQYLFTMAREVGLVGPGYIWFIPSLAVGNPNISPPDSFPIGLISIISDRWKMSLRNRV
RDGVAIVVKGVESFRKQKGFIPDGHMDCLSPIRPSTNDSLYRHMLNVSWENTDFSFNSDG
YLVNPAMIIITLDRGRQWDKVGNYEYGILQTRYPVWPRYGTFLEPVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIR
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGETQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVHKSERLDFLLAISRGIYSCFNGVEDTDRKGNMQNPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPESARPSLPTCLIGTDFSHSRLP
CIASVTDNHSPYPQNMDSTTQHLLEKPHVGTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAMRDPPPPTAPKPHVYVDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSHEQYMAG
LGCKKRSHSYVAASPETRRRDDYDVPQSCLAELKSNHLVENHSHTTPCIRSHFQRPSSSC
NSCSKLYLEPEMDDVPLLGKDNMNRRASFLRATWGGDRIRQLDEKPSTSASSTSCINMPD
LFPRVVVTNPKPSKMYGSASNNLRYNMAVEPAYLDPAHMVSYPYKTQKLKYSKSIRLPSY
REAILQNTASLRRSSSTLVHGHYSTYLNSYTDLPVYLSPLPQGPGHFHEHSKDTCHLFPC
VNHCPDNATLVPRLGSRPVLYQNTATGSYEGAGRSNEESLHTVPFSSVRRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccgttgctgctgctgctg
tctgtcttctccgccccccgctgccagtgccgaccgtttgggatggttgagcccaccgtg
aacgtggcggtggtgttcagcggctccgcctaccagttggagatcaaggggcgactgagc
cgggagaacttcctggacctgccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccgcgcactctactgacgcgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tccacccagacggccgtgcccatcgtgggcatcagtgggggatccgccgtcgtcctgcct
cacaagggtgacggttctaccttccttcagctgggctcttccatcgagcagcagatcaat
gggatgttcaagatgatggaggagtacaactgggacagtttcgtggtggtgacgagcatg
tatccaggatacaacaactacgtggactacatccgctcttttattgatacgtcttacttc
ctctgggagttgcaggacatcttgacgtttgacatgtcggccgacggcatgaacgacctc
cgtgcccaccgattacttcagcagatcgacgcacaggtgctgctggtttactgctcgcat
gatgaggcccagtacctgttcaccatggccagggaagtgggtttggttggcccggggtat
atctggtttatccccagccttgcagtgggaaaccccaatatatcacctccagacagcttc
cccattggattgatcagcattatctcagatcgctggaagatgagtttgagaaacagagtc
agggatggtgtagccatcgtagtgaaaggagtggagagcttccgcaagcagaaagggttt
attcctgacggacacatggattgtctgagtccgattcggccatccaccaatgacagtctc
tacaggcatatgctgaatgtgtcatgggagaacaccgacttttccttcaacagtgatgga
tatctggtcaaccctgccatgatcataatcactctggaccgcgggagacagtgggataag
gtagggaattatgagtatggtatcctgcagacgaggtaccctgtctggccccgttatggg
accttcctggagcctgtgtctgacaaccgtcacttgacagtcgccacactggaggaaagg
ccttttgtgatcgtagaagctgtggatcctgtcaccggcacctgcctcagtaacaccgtc
ccctgtagacggcagtccaacaagacagaaacgattgtcggacacactgagccatacact
aaactatgctgcaaaggcttctgcattgacatcctgaaaaagctctctcgcaacatcagg
ttctcctacgacctctacctggtcaccaatggcaaacatggcaagttggtacgagggatc
tggaacggtatgatcggagaggtattttataagcgagcagacatggccattggctctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccgtttgtggagactggc
atcagtgtgatggtggccaggagcaatggaaccgtgtctccgtcagccttcttggagccc
tacagcccagcggtgtgggtgatgatgtttgtcatgtgtcttacagtcgtggcagtgact
gtgtttgtgtttgaatactttagtcctgtgggctacaaccgcagcctggtcagtgccaaa
gatccaggtgggccaacgttcaccatcgggaagtcagtctggctgctgtgggggatcgtc
ttcaacaactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggccttctttgcggtgatcttcctggccagctacacggccaacctggccgccttc
atgatccaggagcagtacattgacactgtttctggactgagtgacaagaagttccagaaa
ccgcaagaccaatatcctccattccggtttgggaccgtgcccaatggcagcacagaacga
aacataaggagcaattatcccgaaatgcattctcacatggtcaagtacaaccaaaaaggt
gtggaggatgctctcaacagtctcaaaactgggaaactggatgccttcatatatgatgca
gctgtgcttaactacatggccggtaaagacgaagggtgtaaattggtgaccatcggtagc
gggaaggtatttgccacgacaggctacggcatcgcccttcagaaagaatctcgctggaag
cgccccatagacctcgctcttcttcagttccttgcagacggtgagactcagaagctgcag
acagtgtggctcactggaatctgtcgtaacgagaagaaagaggttatgagctctaagctg
gacattgacaacatggccggagtgttttacatgcttctagtggcgatgggtctcagtctg
ctggtctttgcatgggaacatctactgtactggaagctacggcattctgtccacaagtct
gagcgtttggacttcttgctggctattagcaggggaatctacagctgctttaacggtgtg
gaagacacagaccgtaaagggaacatgcaaaacccggatgtcaccaccagttacactcag
gccaacatgctgaagatgctccaaaccgctaaggacattgtctcatctgcaagagttgaa
aactccttggacaatgccacaaagaccatagagaactggagtcgacgtgatccagagtca
gccagacctagtcttcctacctgcctcataggaacggacttcagccacagtcgcctgccc
tgcatcgccagcgttacagacaaccactcaccgtaccctcaaaacatggacagcactact
cagcacttactggagaagcctcatgtgggaacacggcctacctcactgcgctacactctt
cccgcacgcaccagccaccaccacatctatgaacgaacgctaccaatatctagcctcagt
agtccccatattgccatgagagaccctccacctcctacagccccaaaaccccacgtgtac
gtggaccagtcctgtcaccaccctacctctcgctacgtctcttaccgtgactttcaggta
ccggacatctttgtggaacaccaagaaccttcggggagccatgaacaatacatggcaggt
ctgggttgcaaaaaaaggtctcatagctacgtggcagcatctccagaaactcgacggagg
gacgactatgatgttccccagtcctgtctggctgagcttaaaagcaaccaccttgtggaa
aaccattcccatacgacaccttgcataagaagccacttccagagacccagctctagctgc
aactcctgctccaagttgtatctagaaccggagatggatgacgttccccttctggggaaa
gataacatgaaccgtcgcgcctcttttctcagggctacttggggtggtgacaggatccgg
cagctggatgagaagccctccacctctgcatcttcgaccagttgcatcaacatgcctgat
ctgttccctcgagtggtggtgaccaatcccaagccttcgaagatgtatggcagcgccagt
aacaaccttcgctacaacatggctgtggagccagcctatctggacccagcccacatggtc
tcctacccgtataagacgcagaagctcaagtactcaaagtccatccgccttccttcatac
cgggaggcgattctacagaataccgcatccctgcggcgctcttcttccacactagtgcac
ggacactactcaacgtacctgaactcttacacagacctgccggtgtacttgagtcctctt
ccgcagggacccggtcacttccatgagcattccaaagacacgtgccacctgtttccatgt
gtcaaccattgcccggataatgccaccttggtgccccggttaggcagcagacctgtattg
taccagaacactgctaccggaagttatgagggggctgggcgctcaaacgaggagtcgttg
cacactgtgccgttctcttccgtgcgcagggaccgcaggcaggttctagtggcacggaac
gtacacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtt
tga
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