Pimephales promelas (fathead minnow): 120490102
Help
Entry
120490102 CDS
T08155
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120490102 (rbbp6)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120490102 (rbbp6)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
U-box type E3
120490102 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
Siva
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120490102
NCBI-ProteinID:
XP_039543422
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGLKSTSKTYVIDRSEPSGSSKAIDDSSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHEYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLPQ
NQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESEEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAVTQGAQTQATVQRPPLRLATSRQQ
DPLMANVPSSTADSSPPQSTPAAPLSPVITHQPSSTPPSSSTSTVHSSTAPAASNYSPVV
NSPQHSARQDDPPSSKESEVSASTVVPSSETSVPTTSSFPKGFHVPVIGKPNMPQHHMHR
PGQPRTSGPRPTGSRSAWDPSTNRGRGPSERPQRTQPPPVQNLPPVIPPVYGPPALFPPP
PHPMPQPPGVVPQQYPIQYPPGQQPPPPFNIPPPVFPPVPPVTAPWVPPGAQPPIANPIS
SMPAAPFLSKEEFYRQQRRLKEDSQCRFVTREKSSKLEEFTNDFAKELLEYRKIQKERRR
SYSRSKSPYRGSSYSGSSYSYSKSRSRSRSPRSYSRSPSRSRSRSRSRSRSFSRSPYSRR
GRGRSRSYRSRSRTPTYHRSHSRSPSYRGREMSGMGGGIYRSRSRSPMYRNHSPSKKLPP
PSQNEGERKYTGRYRELPPYDAKAYYGRNVDQSDPYERERYREWEREYREWYDKYLKSYN
NPPSGQMRGRIPGTRDPFTPERFAPPRPRENSPYGRGRREDYPPPPQSHSVPPRGRVAMT
YQEKCAEKYGHLHVNTTGAVRGFNKDSSKSIKDREPSGSTATDTKSLKHKKHRKKKRDDD
LFSHSDSMDDSRKDDRKGDSLLINSSRDDATPVRDEPMDSAAVPYKRTPEKEKKERTKSK
SDKGKRRSESSGQKEPSGKISKSVREKESDAPREKGAPTEPAIKRVKDEPSHKSEISKPQ
SSESKLMLPRKLMQSRPIKHHQELKPIKDEIKSRKELVKDLPKQDKVSDKDGKVPKKEQE
KPVKTEEKMHTKASREVPKQEKKKRKDDKPSAKDLDVPPVKVAKMEVDVVKSSPKPKPRL
ESERPVEKEKVAIPSLMDIKPEPVRKIKINREIGKRISSIDRQVSAEDSAHATGKGRLDK
SRGKLRRKVHVSDGSGSLLVDYTSTSSTGGSPIKKHEDKLDLKKTVVKTLEEYTNDSSTP
AEDEIVMIQVPRSKWEKEDYESEDDDSKVATRKDGINTSSSAPSGEDTAAKSTDKESPHD
DKAPTASKEADVKPAKDPTSCDKEKDSDKERERDRGKERDRCSTADREVTDKRKPSVPNQ
EKEHAQEKGSDHGSERSCSSQSSRDRQSDRPEPTSRKPVGRETTTGLASRKPEHRDDARD
HLGTRSKDERSPIRRRVSPSRVKDLHTDSGRKTLEAPPESNRSPSPSRNKRASSQNAPEP
KRTGPEDNKGHWPSSKESQGSRHSDVRPTKDREHRTPHRALTPEPRSDAEKGGVHGDHVK
VLSARSTRLSSDLARETDEAAFVPDYSESDSETSDPESKMEQRGRERDSSGSQSPSPSGS
HGPSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNESESDLKGQKHKHK
KKKSKKSKDKDKDDKEKVESERDEHKAKVSV
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaacttaactacgatacggtcacctttgat
ggccttcacatcacgctcagtgatttgaaacgccagatcatggggcgagaaaagctgaag
gccgcggattgcgacctacaaatcaccaacgctcaaactaaagaagaatacactgatgat
ggtgccctcattcccaaaaactcttctgtcatcatcagacgaatccctattggagggctt
aagtcgacaagcaaaacatatgtcatcgatcgatctgaaccaagtggatcttcaaaagca
attgatgattcttcatccatttcactggccctgctttcaaagacagccaatcttgctgaa
acaaatgcttcagaggaagacaaaataaaagcaatgatgtctcagtccaaccatgagtat
gacccaatccattatgcaaagaagcttgttggtccacctccaccaaactacacatgcttt
cgttgtggaaaaactggacattatatccgaaactgcccaacgaatgggcaggatcgaagt
tttgaagctcctcaacggataaagaaaagcacaggaattcctcggagtttcatggtggag
gttgatgatccaaacagaaagggagtcatgttgaccaacagtggaatatatgccattcct
actattgatgctgaggcctatgccattgggaaaaaagagaagccaccattcttgccccaa
aatcaatcttcatcttcagaggaagaagatcctgtacctgatgagctgctgtgtttgatc
tgtaaggatctaatgactgatgctgtggttatcccctgctgtggaaatagttactgtgat
gagtgtattcggacatgtttgctggagtctgaagaacatgtttgcccaacctgcaaacaa
tcggatgtatctcctgatgctttgatcgcaaacaaattcttgcgccaagcagtgaataat
tttaggaatgaaaccggatataccaagaggattcgaaaagctgcagctgttacacaagga
gcccaaacgcaggctactgtccagcggccacctctgagactggcaacctcacgccagcag
gaccctctcatggccaatgttccgagctccacagctgatagcagccctccccaaagcaca
cctgctgcccctttatctcctgttatcactcatcagccctccagtactccaccttcttct
agcacctctactgtacacagcagcaccgcacctgcagcatcaaactatagccctgtggtg
aactctcctcagcactctgctaggcaggatgaccctccttcatctaaggaatcagaggtc
tcagcatctactgtcgtgccttcttcggaaacctctgtccctacaacttcatcttttccc
aagggattccatgtcccagtgattggaaagccgaatatgcctcagcaccacatgcacaga
ccaggacagccaaggactagtggaccaaggccaactggaagccgtagtgcgtgggatccg
tccacaaatcgagggagaggtcctagtgagcgaccacaaagaacacagcctccaccagtc
caaaatcttccgcctgttatccctccagtgtatggccctcctgctctatttcctcctcca
ccacaccctatgcctcagcctcctggtgttgttcctcagcagtatcccatacagtatcct
cctggacagcagcctccccctcccttcaacattccaccacctgtatttccacctgtccca
cctgtgacagctccgtgggtgcctcctggtgcccagccacctatagccaaccctatctct
tctatgccagcagcaccttttctatccaaggaggagttttaccgacagcagcgtagactt
aaagaagattcccaatgtcgattcgttaccagggagaagtcgtccaaacttgaagagttt
accaatgactttgccaaagagcttttggagtataggaagatccagaaggagagaaggcga
tcctactctagatcaaaatctccatacaggggttcttcctacagtggctcatcatattct
tattcaaaatctcgctctcggtccagatcaccacgttcctactctcgatcaccatcccgg
tctcggtcaagatcgcgctcccgatcacgctccttctctcgctcgccatactctcggagg
ggccgaggtcgaagccgtagctatcgatccaggtcacggactcctacataccatcgctcc
cacagtagatctccatcatataggggtcgggagatgagtgggatgggaggtggaatttat
cggtctcgctccagatctccaatgtatagaaatcacagtcccagcaagaaactccctccc
ccttctcaaaatgagggtgagcgcaaatacacagggaggtacagagagctccctccttat
gatgctaaggcttattatggtcgaaatgtagaccagagtgacccctatgagagagagcga
tacagagagtgggaaagagaatacagggagtggtacgacaagtaccttaagagttataac
aacccaccaagtggccaaatgaggggccgtattccaggcaccagagatccctttactcct
gagcgttttgctcctccccgacctagagaaaactccccctatggcaggggacgtcgggag
gactacccgccaccacctcagagccacagtgttcctccaagaggcagagtggcaatgaca
taccaagaaaagtgtgctgagaagtatggccaccttcatgtcaacaccactggagcagtg
agaggatttaacaaagattcttcgaaatctatcaaggaccgagaaccaagtggcagcact
gctacagacaccaagtcactgaaacataagaaacatcgcaaaaagaaaagagatgatgat
ctattcagccactctgactctatggatgattccagaaaagatgatcgtaaaggggactcc
ttgctgattaattcaagccgtgatgatgccacacctgtcagggatgagcccatggatagt
gctgcagtgccctacaagagaacccctgaaaaggagaagaaagagaggactaaaagcaaa
tctgacaaaggtaaacgaaggtctgaaagcagtgggcagaaggaaccatcgggcaagatc
tcaaaatctgttagagagaaggaatctgatgcaccgcgagagaagggggctcccactgaa
ccagccattaagagagtcaaagacgaaccatcccacaaatctgaaataagtaaacctcag
tcttcagagtccaaactcatgctcccacgcaagttgatgcagtctaggcccattaaacac
caccaggagctgaagcccatcaaagatgagatcaaaagcaggaaggaattggtgaaagac
cttccaaagcaagacaaagtatctgacaaagatgggaaagtccccaaaaaagagcaagag
aagcctgtgaaaactgaggagaagatgcacaccaaggcatcaagagaagttcccaaacag
gagaaaaagaaacggaaagatgacaagccatctgcgaaagacctggatgtccctcctgta
aaagtagcaaaaatggaagttgacgtggtcaaaagctctccaaaacctaaacccagattg
gagagtgaaaggccagttgagaaggagaaagtagctattccgtctctgatggatattaag
cctgagcctgtaagaaagattaaaatcaacagggaaattggcaagagaatatctagcatt
gatcggcaagtttcagctgaggactctgctcatgccacaggaaagggcaggctagacaag
tctagaggaaaattgagaaggaaggtgcatgtttctgatgggtctggatccttattggtt
gattacaccagcaccagctccacaggaggaagccccatcaaaaagcatgaggataagctt
gacctgaagaagactgtggtaaagaccctggaggaatacactaatgacagctccacccct
gctgaggacgaaatcgtcatgatacaggtgccccgttccaagtgggaaaaggaggactat
gaatctgaggacgatgattctaaggttgcaactagaaaagatggcatcaacacatccagt
tctgctccttcaggggaggacactgctgcgaaatcaactgacaaggagtctccccatgat
gataaagctcctactgcctccaaagaggcagatgtcaaacctgctaaggaccccacatca
tgtgataaggagaaagattctgacaaagagcgagaaagggacagagggaaagaaagagac
cgctgcagcactgcagatcgtgaggtaactgataaaaggaaacctagtgtacctaatcag
gagaaagaacatgcacaggagaaaggcagtgaccatggcagtgaacgcagctgctcttcc
cagtcttccagagacaggcaatctgacaggcctgaaccaacctctagaaagccagtaggt
agagagacaacaacaggccttgccagtaggaaaccagagcatagagatgatgcaagagac
cacttaggcacaagatcaaaagatgagagaagtccaatcaggaggagagtatcgccctca
agggtaaaggacttgcatacagactctgggagaaaaacacttgaagccccaccggagtcg
aataggagtccaagtccaagcaggaataagagagcatcatcgcagaatgccccagagcca
aaacgaactggcccagaggataacaaaggacactggccatccagtaaagagagccagggt
tctaggcattctgatgtgcgtcctacaaaggaccgtgagcacaggactcctcatagagct
ttgactccagagcctaggtctgatgcagagaaaggtggcgtgcatggcgaccacgtcaaa
gtcctatcggcgcgctccacaagactgtcatcggatttagcacgggaaactgacgaggct
gcgtttgtccctgactacagcgaaagtgacagcgagacttcggaccctgagagcaaaatg
gagcagagaggacgagagcgggacagcagtggcagccagagcccaagcccctctggaagc
catggacccagcagcagccccagctctccgggcagtcaggacagtaaaaaaaagaaaaag
gacaaaaaggagaagaaggaaaagaagaaacacaagaagcacaaaaaacacaaaaagcat
aagaaacatacaagtaatgagtctgaatcagatctcaaaggacagaaacacaagcataag
aagaaaaagtccaaaaagagcaaggacaaggacaaagatgacaaggaaaaggttgaaagt
gaaagagatgaacataaggcaaaagtctctgtttaa
DBGET
integrated database retrieval system
