Pimephales promelas (fathead minnow): 120490110
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Entry
120490110 CDS
T08155
Symbol
flr
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120490110 (flr)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120490110 (flr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_12
ANAPC3
TPR_1
TPR_7
TPR_CcmH_CycH
TPR_14
TPR_16
TPR_6
ARM_TT21_C
TPR_8
TPR_Slam
SRP_TPR_like
TPR_EMC2
Pox_G9-A16
Ribosomal_S16
DUF6891
BEX
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
120490110
NCBI-ProteinID:
XP_039543434
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MPLTAIKDGEYTATVYKMIKEGRYGDAIHILSKEHQKHTKSRAALSLLGYCYYHMQDFTN
AAECYEQLTQLHPEVEDYKLYYAQSLYGACAFPEAMKATFLLDSTASHTKMIKLQAAIKY
GEEDFSGAKTLVEQLPQDDPDYDVDLGCLLYKEGEYEEACKKFMSSMNVLGYQPDLAYNI
ALCYYSLKQYASALKYIAEIIERGIREHPELSIGMTTEGIDVRSVGNTLVLHETALIEAF
NLKAAIEYQLKNYAAAQEALTDMPPRSEEELDPVTLHNQALMNIDTKPTEGFEKLAFLLQ
QNPFPPITFGNLLLLYCKYEYFDLAADVLAENAHLTYTFLTPYLYEFLDAMITCQTAPEE
AFRKFDEMAGKLTEQLRKVTKQVQEARHSRDDDSLKKHVQDYDEVLERYIPVLMAQAKIY
WNRENYSMVEKIFHKSLEFCNEHDTWKLNVAHVLFMQDNKYKEAIGFYEPIVKKHYDNLE
QCNIQECPCKTKPSILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYEEPDK
KVFHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMA
KHMIMLRDPVVQECIQFLEHCELYGKDVPAIIEQPLEEDRMHIGKNTVTYESRLIKALFY
EVTGWNE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaacagcgattaaagacggcgaatacacggccaccgtgtacaaaatgataaaa
gaagggcgatatggagacgcaattcatattctgagcaaggaacatcagaagcacactaaa
tccagggctgctctgtctctcctaggctactgctactatcacatgcaggacttcactaat
gcagcagagtgttatgaacagctgacacagcttcacccagaggtggaagactacaaactt
tactatgcccagtctctatatggagcgtgtgcattcccagaggccatgaaggctactttt
ctcttagacagtacagctagtcatactaagatgatcaaactgcaagctgccattaaatat
ggagaggaagatttttcgggagcaaagactctggttgagcagttgcctcaggatgatcca
gactacgatgtggatctcgggtgtttgctttataaggagggcgagtatgaagaggcttgc
aaaaagtttatgtcctccatgaacgtcctgggctaccagccagatctggcatacaatata
gcactctgttactatagtttaaagcagtacgcttcagcactcaaatatattgcggaaatt
attgaacgtggaatcagagagcatccagaactcagtattggaatgacaacagaaggcatt
gatgtaagaagtgtcggcaacaccctggtccttcatgaaactgctttgattgaagccttt
aatctgaaagcagctattgaataccagctgaagaactatgctgcagcacaagaagcactg
actgacatgccccccagatcagaagaggagctggatccagtcactcttcacaaccaggcc
ctaatgaacattgacaccaagcccacagagggttttgagaaacttgcttttctccttcag
caaaaccccttccctcctatcacttttggcaacttattattgctttactgtaaatatgag
tactttgacctcgccgcagatgtcttggctgaaaatgctcatctcacttacacgtttctc
acaccgtacctctatgagttcttggatgccatgatcacatgtcagacagcacccgaggaa
gctttccgaaaatttgatgaaatggctggaaaactgactgagcaactacgcaaggttaca
aaacaggtgcaggaagcaaggcatagtcgggatgacgattccttaaaaaaacatgtccaa
gactatgacgaggttcttgagaggtacattcctgtgctaatggcacaggccaaaatctac
tggaaccgtgagaactacagcatggtggaaaagatctttcacaagtcactggagttctgc
aatgagcatgatacttggaaacttaatgttgctcatgtgctcttcatgcaagataacaaa
tataaagaagctattggtttctatgagcccatcgttaagaagcattatgataatctggaa
cagtgtaacattcaagagtgtccctgcaaaacaaaaccctcgatccttaacgtcagtgca
attgttcttgctaacctgtgtgtgtcttacatcatgaccagccaaaatgaagaggcagag
gaactgatgaggaagatagagaaagaagaggagcagatctcttatgaagagccagacaaa
aaagtatttcatctgtgtattgtaaaccttgtaatcgggactttgtactgtgctaaaggg
aactatgactttggtatttctcgtgtcataaagagtcttgagccatacaacaaaaagctt
ggaacagacacgtggttctatgctaagagatgttttctctcactactggaaaacatggcc
aaacacatgatcatgctcagggatccagtggtgcaagagtgcattcagttccttgagcac
tgtgaattgtacggtaaagatgtgcctgccataatagagcagcctctggaggaggaccgc
atgcatattggcaagaacaccgtcacgtatgaatctcgcctgataaaagctcttttctat
gaagtcacaggatggaatgagtaa
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integrated database retrieval system
