Pimephales promelas (fathead minnow): 120490301
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Entry
120490301 CDS
T08155
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
pprm04517
IgSF CAM signaling
pprm04530
Tight junction
pprm04810
Regulation of actin cytoskeleton
pprm05100
Bacterial invasion of epithelial cells
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120490301 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120490301 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
120490301 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120490301 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120490301 (arpc1b)
05100 Bacterial invasion of epithelial cells
120490301 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120490301 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120490301 (arpc1b)
Membrane trafficking [BR:
pprm04131
]
Others
Actin-binding proteins
Arp2/3 complex
120490301 (arpc1b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120490301 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_EML
Beta-prop_TEP1_2nd
eIF2A
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
120490301
NCBI-ProteinID:
XP_039543710
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGSNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVTWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKP
APTAWGSKMPFGEIMFESTGTSGWVHGVCFSESGNRVAWASHDSTVAVAEGGKTAVCASL
SSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKASVDSKEAILESVHKNSISQISILNGGKAKCAKFCTTGMDGGMAIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcacagttttcttcttgaacctatcagctgccatgcctggaacaaggaccga
actcaaatagcactgtgtcctaataaccacgaagtccatatctacaagaaggacggaagc
aactggaacaaaatccatgtgttgaaggagcacaatggccaggttactggcattgactgg
gcccctgagagcaatcgcatcgtcacctgcggcaccgaccgtaacgcatacgtctggacc
ctaaagggagacgtatggaagcccaccctggtcattctcaggatcaaccgtgctgcccgc
tgtgtgacctggtctcccaaagaaaacaagtttgctgtgggaagtggctcacgtctaatc
tcggtgtgctattttgagcaggaaaatgactggtgggtgtgcaagcacattaagaagccc
atccgctccaccatcctttgtttggactggcaccccaataacatccttttggcagctgga
tcatgtgactttaaatgcaggatcttctctgcttacataaaggaagtagaggagaagcct
gctccaacagcatggggctctaaaatgccatttggagagatcatgttcgaatctactggg
acttcaggttgggtgcacggcgtctgcttctcggagagcgggaatcgcgtggcctgggcc
agccatgacagcactgtggcagtggccgagggaggaaagactgctgtctgcgccagtctg
tcttctgaaaccttgcctcttctgtgtgtgactttcattactgagaacagcctagtggcg
gctggccacgactgctaccctgtgttgtttgtctacgattcgaacaatgcagccctgtct
ttcggaggaaaacttgacgtgcccaaacagagtgctcagaagggcatgacagccagggaa
cgcttccagaacttggataaaaaagcctctgtagacagcaaggaagcaatccttgagtct
gtgcacaagaacagcatcagccaaatctcaatccttaatggtggaaaagccaagtgtgcc
aaattctgcaccactggtatggatggaggcatggctatttgggatgtaaagacccttgaa
tctgcaatgaaagatctcaagattgtctag
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integrated database retrieval system
