Pimephales promelas (fathead minnow): 120490305
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Entry
120490305 CDS
T08155
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm00514
Other types of O-glycan biosynthesis
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120490305 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120490305 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pprm01003
]
120490305 (colgalt1a)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120490305 (colgalt1a)
Glycosyltransferases [BR:
pprm01003
]
O-Glycan biosynthesis
O-linked Gal type
120490305 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
120490305
NCBI-ProteinID:
XP_039543712
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MVWVVLFVSVLWCSLMNTRPAQGYFHEERWSPESPILAPRVMIALICRNTQHSLPYFLGT
IERLNYPKDRIALWVATDHNIDNTTYLLRDWLINVQKLYHYVEWRPKEESREYHNEEGPK
DWTNERYAYVMKLRQAALESAREMWADYLMMIDCDNLLINRDVLWKLIHENKTIVAPMME
SRAAYSNFWCGMSSQGYYKRTPAYMPMRKHVRRGCFAVPMVHSTFLVDLRKEASRTLAFH
PPHSDYTWAFDDIIVFSFSARMGEVQMFVCNKETYGYLPVPLRAHSTLQDEADSFIHTVL
EVNVRNPPVEPSRYLPKPVKKPDKMGFDEVFIINLKRRDDRRERMLRALREQEIDCKIIA
AVDGKAMNESEINAMGIHMLPGYSDPYHGRPLTRGELGCFLSHYNIWKEIVDRGLKTSLV
LEDDLRFEIFFKRRLKNLMSEVKSKGLDWDLIYIGRKRMQVDRPEKAVPIIRNLVEADYS
YWTLGYMMSLQGAKKLLKAEPLQKMLPVDEFLPIMFNKHPVLDYMEQFETRDLKAFSAEP
LLVFPTHYTGEPGYISDTETSTVWDNERVPTDWDRKRSGKTREQAEISTEAQNSDVLQSP
LDRTARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggttgtgttgttcgtgtcggtgctgtggtgcagtctgatgaacactagacca
gctcaaggatacttccacgaggagcgctggagcccggagtctcccatattagctccccga
gtaatgatcgctctcatctgcaggaacacacaacactctctgccgtatttcctcggaact
attgagcgcctcaattacccaaaagaccgaatcgcgctctgggtagcaaccgaccacaat
attgacaacactacatacctactgcgagactggctcatcaatgtgcagaaactctaccat
tacgtggaatggaggccgaaggaggaatcaagagagtatcataatgaggaagggccaaag
gattggacgaacgagcgctacgcctacgtcatgaagctgcggcaggcagcgctggagtct
gcgcgagagatgtgggcagactatctcatgatgattgattgtgataatcttctgatcaac
cgagacgtcttatggaaactaatacatgagaacaagacaatcgtggcaccaatgatggag
tctcgcgctgcctactcaaacttctggtgtggaatgtcatcccagggctactataagcga
actcctgcctacatgcccatgcgtaagcacgtgcgtaggggttgctttgccgttcccatg
gtgcactcgactttcctggtggacctgcgcaaagaagcttccagaacgctggcttttcat
ccaccacactcagactacacctgggcctttgatgacatcatagtcttctctttctccgcc
cgcatgggagaggttcaaatgtttgtttgtaacaaggaaacttatggatatctcccagtt
cctcttcgtgcccacagcactctgcaagacgaggccgacagcttcattcatacagtgctg
gaggtcaatgtgagaaatcctccagttgagccctccagatacttgcccaaacccgtcaaa
aagcctgacaaaatgggctttgatgaggtgtttataatcaacctgaagcgacgggacgac
cgccgtgagcgcatgctgagggctttgagagagcaagagatcgactgcaagattatcgct
gctgttgacggcaaagctatgaacgagagtgagatcaatgctatgggaatccacatgctt
cccggctacagtgacccgtaccacggcagacctctcacaagaggagagctgggctgcttc
ctgtcccactacaacatctggaaagagattgtagacagaggcctgaagacctcgctggtg
cttgaagatgatttgcggtttgagattttcttcaagcgacgcctgaagaatttaatgagt
gaggtcaagagtaagggtctggactgggacctcatttatattgggaggaagaggatgcaa
gtcgaccggcctgaaaaagcagtaccaataattcgcaacttggtggaggcggactattct
tactggaccttgggttacatgatgtcattgcaaggagccaaaaagctcctcaaagcagaa
ccactccaaaaaatgttgcctgtggatgaattccttcctattatgtttaataagcatccc
gtattggattacatggagcagtttgagacgagggacctgaaagcgttctcagccgagccc
ttgcttgtgttccctacgcactacacgggcgaacctgggtacatcagtgacactgaaacc
tccacggtgtgggacaatgagagagtgcccacagactgggacaggaagcgctcgggtaag
acccgggaacaggctgagatcagcacagaggcccaaaactcagatgtgctccagtctcct
ctggacaggacggcccgagatgaactatga
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integrated database retrieval system
