Pimephales promelas (fathead minnow): 120490317
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Entry
120490317 CDS
T08155
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120490317 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120490317 (gtf2f1)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120490317 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Med8
Motif
Other DBs
NCBI-GeneID:
120490317
NCBI-ProteinID:
XP_039543726
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MTSLGSSSSSTTEYVVRVPKNTSKKYNLMAFNAGDKVSCSTWTQARMERDMSNRRIYGEE
ENQEGAAGSEFGKKQREESRRKKYGIITKEFKVEDQPWILKVNGKAGRRFKGLKKGGVTE
NASYYIFTQCADGAFEAFPVHAWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFQEQERGDEDEEEGEKGGKKKKKKKGGRGGDLRIHDLEDDFEMSSDESDGSNGEDDEAK
SKGKKDKGPKGKGKKKKKKGSDFEGFEDSDDGDFEGLEVDYMSDESSSEEEEQEKTKPNK
GEDVPKGVDEMSESEEESEEENKNEEDAKEEEEEEDGKKTPVQVEKKKKKDSSGESDSSE
DSDIEGEAASALFMVKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDNAATSNTLRAAASKL
EQGKRQTTVPSTETPAAKRLKMEPSPQSSSGKSTPQPVSGKSTPSTSDVQLTEDAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINEKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggggagcagcagttcctccacaacggagtatgtagtacgagttccaaaa
aacaccagtaagaaatacaacttaatggctttcaatgctggtgataaagtcagctgttct
acatggactcaggctcgtatggagcgggatatgagcaatagacgtatatatggtgaagag
gagaatcaggagggggcggcaggcagtgagtttggaaagaaacagagagaggaatcacgg
agaaagaagtatggcatcattacgaaggagttcaaggtggaggaccagccctggatcctt
aaagttaatggaaaggcaggaagaagattcaagggtctgaaaaaaggcggggtcacagag
aatgcgtcctactacatcttcacccagtgtgccgatggtgcctttgaggcgtttcctgtg
cacgcctggtataacttcacaccgcaggccaaacaccgcactctcacagccgaggaggca
gaggaagagtggggcaggaggaataaagtggtgaaccacttcagtatcatgctccagcga
cgtttccaagaacaggagcgaggagacgaggatgaggaggaaggagaaaaaggagggaag
aaaaagaagaagaagaagggaggcagggggggagacctgcgcatacatgaccttgaggat
gacttcgaaatgagcagcgatgagagcgacggcagcaatggagaagatgatgaagctaag
tcgaaaggtaaaaaggacaaaggccccaaaggcaagggaaagaagaagaagaaaaagggc
agcgactttgaaggattcgaggatagtgatgatggcgactttgaggggctggaggtggac
tacatgtcagacgagagcagttctgaagaagaggagcaagagaagaccaagcccaataag
ggagaggacgtccctaaaggagttgatgaaatgtctgaaagcgaggaagagagtgaggaa
gaaaacaagaatgaagaagatgccaaggaggaagaagaggaggaagatggaaagaagaca
ccagtgcaggtggaaaagaagaaaaagaaagacagcagtggcgagtccgacagctccgag
gacagtgatattgaaggagaggcagcttcagcactgttcatggtgaagaagcgcacacct
cctaagcgagggggtgggcgaggatcagcaggtagttcaagaacgggaagtcgacctggc
acaccttctatcgacaacgctgccacttcaaacactctgcgtgccgctgccagcaaactg
gaacaaggtaagcggcagacgacagtaccgagcacagagactccggcggcaaagagatta
aagatggagcccagccctcagagctcctcggggaagagcacaccccaaccagtatcaggg
aaatccacccccagcaccagtgatgtgcagctgacagaggacgccgtgcgcaggtatctc
atcaggaagcccatgaccactaaagacctgctgaagaagttccagactaagcgcacaggc
ctcagcagcgagcagacagtcaatgtgcttgcccagatcttgaagaggcttaacccagag
aggaagaacatcaatgagaagatgcacttctacctcactgagtga
DBGET
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