Pimephales promelas (fathead minnow): 120490680
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Entry
120490680 CDS
T08155
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120490680 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120490680 (usp42)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120490680 (usp42)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120490680 (usp42)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120490680 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120490680
NCBI-ProteinID:
XP_039543944
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MTIVDKPPEKSDLESVRCKHSSSLTSFSSRDMESSSSSWSVGSSATEHSRAKTACMAPTI
GATVNGSNNTALQVERPREQVVMNSGDGIALPQKVLFSPERLCLKWNQGHRIGAGLHNLG
NTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHVIQVFANSGNVIKPI
SVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVHQIFGGYL
RSRVKCLNCKAVSDTFDPFLDISLEIKTAQTLTKAFEQFVKPEQLDGDNAYKCSKCKKMV
TASKRFTIHRSSNVLTVSLKRFTNFNGGKITKDVRYTEYLDLRPFMSQSHGEPQIYALYA
VLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFYIRSPDVKNG
SDFSQMNHTPGQSSPRPSIPIKMNGPQYTSTSFIGPQLPPHMLKNSSCVNGNGSSKDYHG
GSKPNRSFCGVTKIGSGLSNTSSSASASSSSSLVRPTGIPDSSKRPKLTFLIGQGKPVRP
AQTQSSPNCSLSSASQPQPTSSSTSMSTSGFPQVKQVNGTHSGASFLVPYGQESSEESDQ
EAGALENGLAKPHLAPEINNGNGVKGDAQSHNSSSLPQFTSKTNGSNGFHVCESGSESAH
KSQNGLSKANGFNHTDKVMGTSHPSSQISNTSDSSGMQFSLKCENGESSSKPLSTDAPCS
SPSNKRMNPPSDALSQSEVHLESAPSSNASLVSKTGDTDLHCQTTSKVESIPSRAAHTAA
GTSDRQVNNSLNLHIGDGHTSPHRLKEVFRCSEGESKDSKPSHLDKFGSGVGQRVGEDGN
KISQRPHFSSPPKDRDQDRDRDRDRYRYHREYSERSRSRYGYSHRDSRPFRERSSSRDRH
HRDREVERHWDRFSHHRREHHHSQRRPREERNWSRDRRFVSETYRPSGHHNRDIYSSHSN
RGVEGAHGRTALTVNSSKSRRSSSRSLSPMSGHNKRKRSPSSDARESSDECRAKKSKKKK
RNKHRRSERDPSEGNEDSSSKRHKKKKKKKKRRREEEERPHTWRDNALRREEHDTRARNG
AERGSQHHSSESLNNVHRDHKEDQQQLNGQKANGCYSGSEPDLCPTGTEKDVKYKHFDHA
TTVNSTKTLSNGNGDIDGLYHRTLSDVQEVTRPH
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaacctccagagaaatctgacctggagtcagtccggtgcaagcac
tccagctccctgacatctttctcctccagagacatggagagcagtagttcgagctggagt
gttgggtcttctgccactgagcattcaagagccaagactgcctgtatggccccgaccatt
ggagcgactgtgaatggtagtaataacacagcactccaagtcgaaaggcccagagagcaa
gtggtgatgaacagcggggatggcattgcgcttcctcaaaaggtcttgttttccccagag
cggctctgcttgaaatggaaccagggccaccgcattggagcaggtctccataacctgggc
aacacatgtttcctgaactctaccctgcagtgtctgacttacacggctccccttgccaac
tacatgctgaccagagagcattccaaaacatgtcatgagcctgggttttgcatgatgtgt
accatgcagaatcacgtcatccaagtgttcgccaactctggaaatgtcataaagcccatt
agtgttcttaatgaattgaaacggataggaaagcatttcagatttgggagccaagaagat
gcccatgagttcttgaggtacacagtggatgctatgcaaaagtcttgcctccctggaaac
aaactggacaggcaaactcaggcaaccacttttgtacatcagatatttgggggttatctg
agatccagagtcaaatgtttgaattgcaaggcagtttcggatacttttgaccctttcctg
gatatatcactggagataaagacggctcagacactcacgaaggcatttgagcaatttgtc
aagcctgagcagcttgatggggacaatgcttataaatgctccaaatgtaagaaaatggtt
actgcatcaaagagattcaccattcatcgcagttctaatgttctcactgtctcactgaag
cggtttaccaacttcaatggaggaaaaattacaaaggatgtaagatacacagagtatcta
gatttgcggccattcatgtctcagtctcatggggagccacaaatctacgctctatatgct
gtgctggttcattctggtttcagttgccacgctggacactactactgctacattaaggct
agcaacggtcagtggtatcagatgaacgactcatctgtatctctcagcgatattagaaca
gtgcttaatcagcaagcatacttgctgttctacattaggtcacctgatgtgaaaaatgga
agcgactttagccagatgaaccatactccaggccagtcatctccacgaccatccattcca
atcaagatgaatgggcctcagtacacctccacatccttcattggtcctcagctgccacct
catatgctcaagaactcgtcatgcgttaatgggaatggttcttcaaaagattaccatggt
ggctccaaacccaacagaagtttctgtggtgtgaccaaaataggttctggactatctaat
acatcctcttctgcatccgcttcctcttcttcttcgcttgttcggcccacgggcattccc
gactcatccaagaggccaaagttgacgtttctcattggtcagggcaagcctgtgagacct
gctcagactcagtcaagccctaattgctctttgtcgtcagcctctcaacctcagcccaca
tcctctagcacctcaatgtctacctcaggcttcccacaggtcaagcaggtcaatggaact
cactctggagcttctttcttggttccttatggtcaggaatcatctgaagaatccgaccaa
gaggctggagcattggagaatggattagctaagcctcatcttgctcccgagattaacaat
gggaatggggtaaagggggatgcccaatcccacaattccagttcactgcctcagtttacg
tcaaagacaaacggatctaatggctttcatgtgtgtgaaagtggatcagaatcggctcat
aaatcccagaatggcctttccaaagccaatggttttaatcatactgataaggttatgggc
acttcacatccttcatctcagatttctaatacgtctgatagttcaggaatgcaattcagc
ttaaaatgtgaaaacggtgaatcaagttccaagccactgagtactgatgccccatgctcc
tcaccttcaaacaaaaggatgaaccctccttccgacgctttatctcagtctgaagtacat
ttagagtctgcaccttcatctaatgcctcattggtctcaaagactggagacactgacctt
cattgccagacaacttcaaaagttgagtcgattccgagccgtgccgcccatacagcggct
ggcacgtcggaccgtcaggtcaacaacagtctcaacctccatatcggtgatggtcacaca
agtccacacaggttaaaggaggtgttcaggtgcagtgaaggggaaagcaaagattcaaaa
ccatcacacttagacaagttcggctctggagttggacagagggtgggtgaggacgggaat
aaaatttcacagcggccacatttttcttcacccccgaaggacagggaccaggacagggac
cgggacagggaccggtacaggtaccacagggaatacagcgaaagaagccggagccgctat
gggtacagtcatcgagatagccgtcctttcagagagcgctcctccagtagagaccggcat
cacagagatcgtgaggtagagagacactgggacagattctcacaccatcgtcgagaacac
caccactcccaaagaagacccagagaggaacgcaactggagtagagataggaggtttgtg
agtgagacttatcgtccttctggacaccataacagggatatatattccagtcacagcaat
cgtggggtggagggagcccatggaagaaccgcccttacagtgaacagttcaaaaagcaga
cgctcatcatcccgctctctcagcccaatgtccggacacaacaagcggaaacggagtccg
tcgtctgatgcaagagaaagttctgatgaatgcagagcgaagaaatctaagaagaaaaag
agaaacaaacacaggcgttcagagagggatccatcagagggaaatgaggatagcagctcc
aagagacataagaagaagaagaaaaagaaaaagaggagaagggaggaggaggagaggcca
cacacttggagagacaacgctctgaggcgggaagagcatgatactagagctaggaatggt
gcagagagaggaagtcagcaccacagctctgagtctctcaacaacgtccaccgagaccat
aaggaggaccagcaacagctcaatggacaaaaagctaatggctgttacagtggaagtgaa
cctgatctttgtcctactgggacagaaaaagatgtgaaatacaaacattttgatcatgct
accactgtcaacagcacaaagacactctcaaatggaaatggagatatagacggtctctat
cacaggaccctttcagatgttcaagaagtcacacgtccacattaa
DBGET
integrated database retrieval system
