Pimephales promelas (fathead minnow): 120490734
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Entry
120490734 CDS
T08155
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 isoform X1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120490734
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
120490734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
120490734
NCBI-ProteinID:
XP_039544060
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MEDKSNSFSSNKEEKVDGNNVFQRQDSILKNSMGSQNMKDHANSVGGKGDREEAMVGFDD
IDAASRQSGFMQRQFGAMMQPGVNKFSLRMFGSQKAVEKEQERVQTAGYWIIHPYSDFRF
YWDLIMLIMMMGNLIIIPVGITFFSEQTTTTWLVFNVASDTIFLVDLVMNFRTGIVNEES
SEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKIL
SLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQ
DFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVGA
TCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKI
FDEDSILNELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYII
REGTVGKKMYFIQHGVASVITKFNKELKLTDGSYFGEICLLTKGRRTASVRADTYCRLFS
LSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSLLLQKFQKDLNAGVFNTQENELLK
QIIRQDREMVMMVDRKQSVTGMNSTPMSGNSIINSPAQPPFTTATAILGNNQLQQQAAPL
SYSTSATITPSGRVPPSQGVTFSAPSVSYGNLSTSSQNPPTPLQQPAGAIMSPCSFTTSI
CSPPVQTPIASRTFQYGSPTASQLSLVQQALPQQSSPVSIPQQPAQQQPQQSQGASPQRS
DVHKSTQALQSGSLSKDIRHLSASQPSLPHEASLAARAHPTSGEPLASIQPPMGSTAGVQ
APGSVLQSGIRTNVPQRVALFRQMSSGAIPPVRMAPSSAQHRDSTGSRRESAVLSSTETE
QDKMRFASNL
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaatccaattcgttttcgagcaacaaagaggagaaagtggatgggaataat
gtgttccagaggcaagactcgatcttgaagaacagcatggggagccagaacatgaaagac
cacgccaactcagtgggtggcaagggggaccgggaagaagccatggtcggttttgacgat
atagacgccgcgtccaggcaatctgggtttatgcagcggcaatttggagccatgatgcag
cccggggtgaataagttctccttgcggatgttcgggagtcagaaagccgtggagaaagag
caggagagagtgcagacggctggatattggatcattcacccctatagtgattttaggttc
tactgggacttgataatgctcatcatgatgatggggaatctaatcatcattcctgtggga
attaccttcttttccgagcaaaccaccaccacctggctcgtgttcaacgtggcctcggac
accatcttcctggtggacctcgtcatgaacttccgaacgggaattgtgaacgaggagagc
tcggagatcatcctggacccaaaggtcattaagatgaactacctgaagagttggttcgtg
gtagacttcctgtcctccatcccggtggattatatctttctaatagtggagaaaggcttc
gattcagaggtctacaagactgcccgagcgctgcgtatcgtgcgcttcaccaaaatcctc
agcttgctccgtcttctcaggctttcgcgcctcatcagatacatccaccagtgggaggag
atttttcatatgacgtatgacctggcgagtgctgtggtaagaatctttaatctgattggc
atgatgttgttgctgtgtcactgggatggatgcctgcagttcctggtgcccctcctgcaa
gacttccctcctgattgctgggtgtccttaaacggtatggttaacgactcctggggaaag
cagtactcttacgccctatttaaggccatgagtcacatgttgtgtatcgggtacggggcc
agggctcctgtcagcatgtcagacctttggatcaccatgctcagtatgatcgtgggcgcc
acctgttacgccatgttcgtgggccacgccacagccctcatccagtctctggactcgtcc
cgacgacagtaccaagagaagtacaagcaagtggagcagtacatgtccttccataagctg
ccagctgacatgcggcagaaaatccacgattactacgaacatcgctaccaaggcaagatc
ttcgacgaggacagcatccttaacgagctcaacgacccactcaaagaggaaattgtgaac
ttcaactgtcgtaagttggtggccactatgcccctgtttgcaaacgcagaccctaacttt
gtgacgggaatgctgagtaaactaaagtttgaggtcttccagcccaacgattacattatc
cgcgagggaaccgtgggtaaaaagatgtacttcatacagcatggagtggccagcgtcatt
accaaattcaacaaagagctgaaactcaccgacggatcctactttggagagatctgcctg
ctgacgaaaggtcgtcgtacagctagcgtccgcgcggacacttactgcagacttttctcg
ctgtctgtggaccatttcaacgaagtcctagaggaatatcccatgatgcgccgcgctttc
gaaaccgtggctatcgaccgcttggaccgcatcgggaagaagaactcactcctgctccag
aaatttcagaaggacctgaacgccggcgtcttcaacactcaggagaacgagctgctgaag
cagatcatccggcaggaccgagagatggtgatgatggtggatcggaagcaatcggtcacg
gggatgaactccacgccgatgtctggaaactccatcattaactctcccgctcagccaccg
ttcactacagcgactgctattcttgggaacaaccaattacagcagcaggccgccccacta
agctacagcacctccgccactataaccccatcaggccgcgtgccgccctcacagggcgtg
acgttttcggcgccaagcgtttcttacggtaacttgagcacctcttcccagaatccccct
acgcccttgcagcagccggcaggggcgatcatgtccccttgttcgttcaccacgtccatc
tgcagtcccccggtgcaaacccctatagctagccgaacattccagtacggatcgccgacg
gcctcccaactgtcccttgtacagcaagccttaccccagcagtcctctcccgtctccata
ccacaacagccggctcaacaacagccgcagcaatcgcaaggggcgtcccctcagaggagc
gatgtccacaagagcacgcaggcgctccagtcaggcagcctgagcaaggacatacgccac
ctctctgcctcacagccgtccctgccccacgaggcctcattggctgcccgagcacacccc
acatcaggcgaaccactggcttccattcagccacccatgggatccacggcaggcgtccag
gccccaggctccgtgctgcaaagcggcatccgcaccaacgtcccacagagggttgccctt
ttccggcagatgtcatcgggcgccataccgcccgtgcgcatggcgccttctagtgcccag
cacagggattccacgggctccaggagagagtcggcagtcttaagcagtacagagacggaa
caagacaagatgcggttcgcatcgaatttatga
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