Pimephales promelas (fathead minnow): 120490751
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Entry
120490751 CDS
T08155
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120490751 (rnf180)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120490751 (rnf180)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120490751 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
120490751
NCBI-ProteinID:
XP_039544087
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MATSFVNEEQDKLRTLEDSTNLRCRKCRRCLIDSTSLLKAVISREAAATCNVWHLNVESL
PDWILSSVGQVNWTVGKLNCQYCGARLGGFNFVNCSKCTCGHETTVHLSKSRVDQDLKPL
VILTRPGRSRRNNVEESLLQTMSLAPSPSSTLNFSYPVFHVVSAETPLEVESSEEPQILE
NVERGTDVPLPPELPLQLNDYRESLEEQHVGSASQSRTSLDTTVDPEGVRLMEEPSRNIL
LNVEPKLSKREKNRLKSLRRKQRKKERWIQRQQEATDLAMKWDLTGSDDEEREGYTCAVC
LDIYYSPYKCHPCSHVFCEPCLRTLAKNRPSNTPCPLCRTLISHVLFQEELNQTTKTCFP
KVYRSRHETFQKINYSKWPLPNCPKRFRIFWGFPRHGGPASRWQFPHRAFGLDALDLGDM
WGWPFDIDFVIISVYSLHWVMAFIIVCGLCYFLLI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctacttctttcgtgaatgaagaacaggataaattaaggacactagaagattcaaca
aacctgcgctgcagaaagtgccgtagatgtctaatagactcaaccagtctcctcaaggcg
gtcatatcaagagaggctgcagccacatgcaatgtgtggcatttaaatgttgaatctttg
ccagattggattttgtcaagtgttggtcaggtcaattggactgttgggaaattaaactgc
cagtactgtggagctcgcttgggaggctttaattttgtaaattgttccaaatgcacctgt
ggacatgaaacaactgtgcatctcagtaaaagtcgcgttgatcaggatctaaaacctcta
gtaattttaacaagaccaggaaggtctaggaggaacaatgtggaggagtctctccttcag
acaatgagtttagctccttctccttcctcaaccctcaacttctcctatcctgtatttcat
gtagtgtctgctgaaactccacttgaggttgagtcaagtgaagaaccacaaattcttgag
aatgttgagaggggcacagatgttcctttacctcctgaattgccgctacagctgaatgat
tatcgggagagtttagaggaacagcatgtgggttctgcttcccagagtaggacttctctg
gacacaacagttgatccagagggcgtcagactgatggaggagccatccagaaacatttta
ctcaatgtagagccaaagcttagcaagagagagaaaaaccgcttgaaaagcctaagaagg
aagcagaggaagaaggaacgctggattcagagacagcaggaggcaacagatttggctatg
aagtgggacctaacaggcagcgatgatgaggagagagagggatacacatgtgccgtgtgt
ttagacatatattacagcccctacaagtgccatccttgcagtcatgtgttctgtgagccc
tgtttgagaactctggccaagaatcggcctagcaataccccgtgtcccctctgtaggacc
cttatatcccatgttctctttcaggaagagcttaatcaaactacaaagacgtgcttccca
aaagtatatcgctcaagacatgagacctttcagaagatcaactattcgaaatggcccttg
cccaactgtccaaagcgttttcgcatcttttgggggtttccgagacacggaggccctgcc
agtcgctggcagtttccccacagagcatttggcctggatgctttggatctgggggacatg
tggggttggccatttgacattgactttgtgattatctctgtctactctctgcactgggtg
atggcgttcatcatcgtctgtggcctctgctacttcctcctcatctaa
DBGET
integrated database retrieval system
