Pimephales promelas (fathead minnow): 120490754 Help Entry 120490754         CDS       T08155                                  Symbol helq Name (RefSeq) helicase POLQ-like   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pprm03400]     120490754 (helq) Enzymes [BR:pprm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      120490754 (helq) DNA repair and recombination proteins [BR:pprm03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     120490754 (helq) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  POLQ_helical HTH_61 DEAD ResIII Helicase_C HHH_5 DUF7898 DNA_pol_lambd_f DUF4332 DUF3135 Motif Other DBs NCBI-GeneID:  120490754 NCBI-ProteinID:  XP_039544091 LinkDB All DBs Position Unknown AA seq 1011 aa AA seqDB search MYTDNHIHDIVVKRNPSSSRKRSRDGIRSHITPAKKRSSFTSTKCTSGEGHNCAQDMTEN KGTELCCSDNEDLFEGYDSIVCDSSFLAKLEDVELQMRQCHDQQTPNLCEDDLSDSTLAE DFRDSPLRALPSSQLEFQKAVTTTPHKSPSRGALNTSTPDLTYPRAAINEADLNVNKPPS KARRSMKDHLKKVLLDNAATSSTVSKTVQQKKAVMTEEMSFAMQAIESISAEGDLGPFFG LPSKVKDLILRFKEIQDLYEWQKACLSLDSLQQRRNLIYSLPTSGGKTLVAEILIFKELL CRKKDALLILPYISLVQEKVRGLSGFGIELDFMVEEYAGSKGKFPPVKRRNKNSLYITTI EKGHSLVNSLIENDRLNNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQIIGMSA TLGNVEDLQTFLNAENYTNDFRPVELKEYVKIKDSIYEVDPKEETCFSFSRLLDFKYSSG MQKMDPDHIIALATEVIPQLSCLIFCATKKNCENLAGMICKYLNKEFLKHKQAEKATLLG ELKSSGNGSLCPVLQKTVPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGIN LPARRVILRSPYVAAEFLKRSQYKQMVGRAGRAGIDAMGESILILQDKDINMAKKLLSAP MEKCYSNLLHDGGRGLHSLVLSLIGLKITTTVEQVRDFMKGTLLSVQEALVSPERSLWDL TVESIETLKQKSLIEASADVHNETILQITRLGRATFKGSVDLNYCDLLYRDLSKGLEGLL LNSFLHLVYLVTPYDMVHQCKPDWMIYFRQFTNLSAAEQKMATAVGVPESFVARKAAGQS VRKSVDIVVVNRLYLALVLYSLLKETNLWNVSDRYQLTRGFVQTLLSSASAFGSSVLHFT EELEEFWAYKSLLLELTRRLTYCVQAELIPLMEVAGVMEHRAKQLYNAGYKTLAHLANAD PQILAQTIENLFKRQANQIIASAKMLIKEKAEALQEEVDDLLMLPSDLPSL NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt atgtatactgacaaccacatacacgacattgtggtaaaacgcaacccttcgtcctcaaga aaaagatcaagggatggcataagaagtcacatcactccagccaagaagcggtctagcttc acatcaacaaaatgtacttctggtgaaggacacaattgtgctcaagacatgactgagaat aaaggcacagagctgtgctgcagtgacaatgaggacttatttgagggttatgacagcatt gtatgtgacagctcctttctggctaagcttgaagatgtggaactccaaatgaggcagtgt catgatcagcagactccaaacctctgtgaggatgatctctcagactctaccttagcagag gatttcagagactcgccactgagagctttgccaagctctcaacttgaatttcaaaaagct gtcacaacaaccccacacaaaagcccctcaaggggtgcacttaacacctctacccctgat ttgacttaccccagggctgctatcaatgaagcagatctcaatgtaaacaagccaccctct aaagccagaagaagtatgaaagatcatcttaagaaagtactgttagataatgcagcaaca tccagcacagtttccaagacagtacaacaaaagaaagctgtgatgactgaagaaatgagt tttgccatgcaggccattgagtccatatcagctgagggggacctgggccccttttttggt ctcccatccaaagttaaagatcttattttgaggttcaaggaaatccaggacttgtatgag tggcagaaagcatgtttgagcctggattcgttgcaacaaaggagaaatctaatttattct ttaccaacaagtggtggaaagactctagtggcagagattctcatatttaaagagctcttg tgtagaaagaaagatgcgctgctaattttgccatacatatctttggttcaggaaaaggtc cgagggttgtctggctttggaattgagttggacttcatggtcgaggaatatgctggtagt aaagggaagtttcctccagtcaagagaagaaataaaaactctctgtacatcacaaccatt gagaaaggacacagtcttgtcaattcactgattgaaaatgaccgcctcaacaatatcggc ctggttgttgtggatgagctccatatgcttggtgatggcagcaggggggcaattcttgaa atgactttgtcaaagattctgtacatgagcaagtcaacacaaattattggtatgagtgca actctaggcaatgtggaagatcttcagacctttctgaatgctgaaaactacaccaatgac tttcgacctgttgagctgaaagagtatgtaaaaataaaggacagcatatatgaagttgac ccaaaagaagagacatgcttcagtttctcacgactcctggatttcaagtactctagtgga atgcaaaagatggaccctgaccacatcatagccctggctaccgaagtcatcccacagctg tcctgcctcattttctgcgccaccaagaagaactgcgagaatctagctggaatgatctgc aagtatttaaataaggaatttttgaaacacaagcaggcagagaaagccacacttctgggt gaactgaagagcagtgggaatggatccttgtgccctgtgctgcagaagactgtgcccttt ggcctggcctaccaccacagcggactgaccagtgatgagaggaagctggtggaagaggcc tattcctcaggggtgctctgcctcctcacctgcacctctactcttgctgctggcatcaac ctccctgcacgcagggtgatcttgaggtccccatatgtagctgcagagtttttaaagaga agtcagtacaaacagatggtgggcagagcaggacgagcgggtattgatgccatgggtgag agtatcctgatccttcaggacaaagatataaacatggccaaaaaactattgtctgcaccg atggagaaatgttatagtaacctgctgcacgatggagggaggggcctccacagtctcgtc ctgtcactcattggcctgaaaataactacaaccgtagaacaagtgagggatttcatgaaa ggcacactgcttagtgtgcaagaggctctggtcagtccagaaaggagtttgtgggatctt acagtggagtccatagagacattgaagcagaagagcctcattgaagcctctgctgatgta cataatgaaaccattctccaaatcaccaggcttgggagagcaacattcaaaggttcggtt gaccttaactactgtgatctgctgtaccgagacttatcgaaggggctggagggtttgctc ctcaatagttttcttcacttggtgtatctggttactccatatgacatggtgcatcagtgc aagccagattggatgatctacttcagacagtttacaaatttgtcggctgctgagcagaag atggccactgcagttggagtgcctgaaagttttgtggctagaaaggcagcaggacagagc gtgaggaagtctgtggatattgtggtagtgaataggctgtatctggctctagtgctgtac tccctactgaaggagacaaacctgtggaacgtgtctgataggtaccagctgactagaggc tttgttcagactctcctcagctcagcttctgcctttgggtcctccgtgctgcacttcact gaggagctggaagagttttgggcctataagtctcttctcttagagctgacccgtagattg acttactgtgtgcaggctgagctcattccactcatggaggtggctggagtcatggagcat cgtgctaagcagctatacaacgctggttacaagacactggcgcatcttgccaacgcagat ccacaaattctggcccaaactattgaaaacctcttcaagagacaagccaatcaaattatt gcatcagcaaaaatgttaataaaagagaaagccgaggccttgcaggaggaggtggatgac ctgcttatgctgccatctgatctcccatctttgtaa

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