Pimephales promelas (fathead minnow): 120490777
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Entry
120490777 CDS
T08155
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120490777 (gabra1)
04082 Neuroactive ligand signaling
120490777 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120490777 (gabra1)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120490777 (gabra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120490777
NCBI-ProteinID:
XP_039544139
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MMWGGRGAAWLWIWACLLVTSVLAGKSSSQNADEQKDNTTVFTRILDSLLDGYDNRLRPG
LGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVM
KTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKES
LLKKNNTYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKAPEAKKTFNSVSK
IDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGAVQPH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggggtggaaggggggcagcgtggctttggatttgggcctgtttactggtgacc
agtgttctggctggaaaaagctccagtcagaatgcagatgagcagaaagacaacaccaca
gttttcaccaggattctggacagcctcctcgatggctatgacaaccgtcttcggcctggt
ctaggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattggaccagta
tcggaccatgacatggagtacaccatagatgtgttcttcaggcagagctggaaggatgag
aggctgaaattcaaaggtcccatggcagtgcttcgtctcaacaatctcatggctagtaaa
atctggacccctgacacatttttccacaatggcaagaagtcagtcgcccacaatatgacc
atgcctaacaaacttctacggatcacagaggaaggaactctgctttacaccatgaggcta
acagtcagagctgaatgtccgatgcacttagaggacttcccaatggatgcccatgcttgc
cctctcaaattcggcagctatgcatacacaagggctgaagtggtgtatgtatggacacga
ggggcagcgcaatctgtggttgtggctgatgacggctcgcgcctcaaccagtatgacttg
atgggacagactgtcgactcgggtgtggtgcaatccagcactggagagtatgtcgtcatg
aaaacacatttccatctcaaaaggaagataggttactttgtcatccaaacgtatttgcca
tgtatcatgaccgtgatcctgtcccaggtgtccttctggctaaacagggaatctgtccct
gccagaactgtgtttggagtgaccactgtccttaccatgactaccctaagtatcagcgcg
agaaactctctccctaaggtggcctatgccacagccatggactggttcattgctgtttgt
tatgcctttgtcttctcggctctcatagagtttgcgacggtaaactacttcacaaagaga
ggttacgcttgggatgggaaaagtgtggtgccagaaaagcaaaagaagaagaaggagtca
ttgctgaaaaagaacaacacctacactgctgcaacagcaacagcttttgctccgaacatt
gccagagaccctggtttggcaactattgctaaaagcgccccccctcccccaactgagccc
aaggaagagccaaaacccaaagctcctgaggcaaaaaagaccttcaacagcgtgagcaag
atcgataggattgccagaatagccttcccgttgctcttcggaacctttaacttagtgtat
tgggcaacctacttgaataaaaaacccaaattacagggtgccgtgcaaccacactaa
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