Pimephales promelas (fathead minnow): 120490842
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Entry
120490842 CDS
T08155
Symbol
si:dkey-247m21.3
Name
(RefSeq) 5-hydroxytryptamine receptor 4 isoform X1
KO
K04160
5-hydroxytryptamine receptor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120490842 (si:dkey-247m21.3)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120490842 (si:dkey-247m21.3)
04082 Neuroactive ligand signaling
120490842 (si:dkey-247m21.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pprm04030
]
120490842 (si:dkey-247m21.3)
G protein-coupled receptors [BR:
pprm04030
]
Rhodopsin family
Biogenic amine
Serotonin
120490842 (si:dkey-247m21.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
120490842
NCBI-ProteinID:
XP_039544263
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MATASDSADDAVDPVMSKHTLRIMLSIVLVTIIILTVLGNLLVIVALCKDRQLRKKKTNF
FVVSLAFVDLLVALVVMPLAAIELTTGQWSYGDTFCLVRTSLDVQLTTVSILHLCCIALD
RYYAICCQPLVYNNKMTPIRVSLMLVGCWVISFFISFLPIMQSWNTIGIESFIEQRKLNS
SRNSTCVFMVNRPYALVCSAVAFYVPLMLMGLAYQRIYITAIGHARRIGSLHRAGSAPSS
TYHNHEQSGSSRIKNETKAAKTLAVIMGCFCLCWAPFFITNVVDPFINYSVPWQMWTAWL
WLGYINSGLNPFLYAFLNRAFRRAFIRILCCGDKRYARQGGFSPSRQHSESVKGTSISLR
LSFLQSRRYSNNSNRFLSSELESQESVGAS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcatcagactcagcggacgatgcagtggatccagtcatgtctaaacacact
ttaaggataatgctgtctattgtcctggtaaccatcatcatattgactgtgcttggcaat
ttgcttgtgattgtggctctctgtaaagacagacagttaaggaagaagaagaccaacttc
ttcgttgtatccctggcctttgtagaccttctagttgcccttgttgtgatgcccctggca
gccatagagttgaccacgggtcagtggagttacggagacacgttctgcttggtccgtacc
tcactggacgtgcagctgaccactgtatctattctgcatctgtgctgcattgcactagac
aggtattatgcgatttgctgtcagcctctggtctacaataacaagatgacacctataaga
gtctcactgatgctggttggatgctgggtcatctcctttttcatctctttccttcccatc
atgcaaagctggaatactattggaatcgagagctttatcgaacaaagaaaattaaactct
tcccgcaattcaacttgtgtgttcatggtgaaccgaccctatgccctggtgtgttcagcc
gtggccttctatgtgcctctgatgctgatgggtctcgcctatcagcgaatctacatcacc
gctatcggtcatgcccggcgaatcggatctctgcatcgggccggctcggccccttcgtcg
acttaccataaccacgaacaatcaggctccagtcgcattaagaatgaaaccaaggcggcc
aagacgctcgctgtcattatgggctgcttctgcctgtgctgggcgcccttcttcattacc
aacgtggtggatcccttcataaattacagcgtgccctggcagatgtggaccgcttggctc
tggttgggttacatcaactcgggcttgaatccgttcctgtatgcttttctgaaccgggct
tttcggagagccttcattaggatcctgtgctgtggggataagcgctatgcccggcagggg
ggctttagtcccagcagacaacactcagagtctgtcaaaggaacctccatttctctcaga
ttgtcatttcttcaaagccgaagatacagcaacaattccaaccgatttttgtcgagtgag
ctggaatcacaggagtctgttggtgcatcatag
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