Pimephales promelas (fathead minnow): 120490854
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Entry
120490854 CDS
T08155
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120490854 (abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120490854 (abraxas1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120490854 (abraxas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MPN_2A_DUB_like
GPS2_interact
JAB
Phage_GP20
VPS51_Exo84_N
CENP-Q
Cluap1
DUF5798
AATF-Che1
DASH_Spc19
DUF7607
Motif
Other DBs
NCBI-GeneID:
120490854
NCBI-ProteinID:
XP_039544282
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MEEFNTTVRISGFVLSSLMFHHLNSDADVEGLILGESIGEENCRITDSQIDHIQFEHTIN
IQKHIPCHKLHSFYGNAGDVSEQKIRQILSDYKKENVIGWYRQRRNTKQQMTFMEQVIHQ
NMRKILSSQELVFMLLTPSQAMASGSTHRLEFSAFLWHSSQYNNIPILVSNLGNLEQQDY
WRVSGTCPSLGQSQAVNQHRTKFFCTEDDLKEVRNVSDMNDALLAEMQKVCKEVEKSERA
VEKLQEDITQLKEAIGKQKRHSEKNESHKCASPEEPKENIPLCSALRTLFPNAPSLRTQT
LTVQGFPILELCCNSDHNIDISTKLPLILENQLTRRKDAAPRLRKKCLAAGFSPRLKRKR
KTNDNSESAPESGSDAEIELNGQSRTNSPVF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattcaacacaactgtccgtatatcgggtttcgtgttgagttcactgatgttt
catcatttgaacagtgatgcggatgtggaaggtcttattcttggagagagtataggagag
gagaactgtaggatcacagactctcaaattgatcacatacagtttgaacacactataaat
attcaaaaacacatcccttgtcataaactgcatagcttctacggtaatgctggcgatgtg
agtgagcagaaaataagacagattttgtcagattacaaaaaggagaatgtgattgggtgg
tatagacaacgaagaaataccaaacagcaaatgaccttcatggaacaagtgattcatcag
aatatgagaaagattctctccagtcaggaacttgttttcatgttgctcacaccctctcag
gcaatggcttcaggctccacacatcgccttgagttctccgctttcttatggcacagcagc
cagtacaacaatatccccatcttggtgagcaacctgggaaaccttgaacaacaagactac
tggagagtgtcaggcacatgtccatctttaggacagagtcaagctgttaatcaacacagg
accaaattcttctgcacagaggatgatttaaaagaggtcagaaatgtcagtgacatgaat
gatgctttattagcagaaatgcagaaagtgtgcaaggaagtggagaagagtgaaagagca
gttgagaaacttcaagaagacattacgcagctaaaggaggccatcgggaaacagaagaga
cactctgagaaaaacgaatcccacaaatgtgcctctccagaagaacccaaagagaacata
cctctatgctcagctctgagaactctgttccccaatgcgccctcattacggacacagacc
ctcactgttcagggcttccccatattagaactgtgctgtaattctgaccataacattgat
atttccaccaagctgcctctgattctggagaatcaactcaccaggaggaaggacgcagcc
cccagacttaggaaaaaatgccttgctgctggtttttctccgagacttaaaaggaaaagg
aagactaatgataacagcgagtcggcccctgagagcgggtcagatgcagagattgagttg
aatggacagagcagaactaactcccctgtcttttaa
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