Pimephales promelas (fathead minnow): 120490875
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Entry
120490875 CDS
T08155
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120490875 (nefma)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
120490875 (nefma)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
HIP1_clath_bdg
Homez
Motif
Other DBs
NCBI-GeneID:
120490875
NCBI-ProteinID:
XP_039544306
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MSYSIDTIGSPYRRVMDTRTSYSSPSSGFRSQTWSRASPSSSSYKRSFNVPVARAYGSTV
LSSTDSLDFTQTSILNGDYKRSNEKEQLQGLNDRFAGYIDKVHFLEQQNQQIEAEIQALR
QKQVSQSQLGELYDQELQELRSMLEQIHNEKAQIQLDTDHIDVDIQRLRDRFDEEARIRE
ETEAIVRALKKDMGDSALVKAELEKKVQSLQDEIAFIRNNHQEELSDLLAQVQASQITVE
KRDYQKTDITDALREIRSQLEGHSTQNLQQVEDWFVCRYSKLTEAAEQNKGAIKSARDEI
ADYRRQLQSKTIELESVRGTKESLERQLNDIEDRHNNDLSSLQETIHQLENELKSTKWEM
ARHLREYQDLLNVKMALDIEIAAYRKLLEGEESHFSTFPYRQTVTKGSKVKSEPPKLKVQ
HKFVEEIIEETRVKDEKSEMDEALAEMAEELSAAKEEDEGEEKGEAEGEKGGDEEGEKGE
EGEGEVEEGEEEVVASTQAKVASGAPAEDEEEGEKEGGDEEQEEEAGKVDEEEEKGEEGT
EGEEDKKEDDAEDEAEETKSPKAKASPESEKAEEKEASGGEEEGEEGDEKDEADAGSDKG
STDEKEAEAKEQPKKTETAKEDKKGKEEKEEAKSEKDSAPVKETKTETTKPESPKSESPK
SESPKETPKTETPKKEAPKSESPKTESPKKEEPKEEPPKKEAPKSEPPKAETKDSPKPAD
EKKSEPEKKPDDKQKEATVNGDMAKKDKKNESDKVVSNGVDESPTKDESSQRVVITKTVE
TITTGEGGVKQVTKTVTVTEKGEEVDESVGEKVVSKTPEKAVKSTEAD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagttattcgatagacactatagggagtccctaccggagggtgatggacaccaggacg
agctattcgagcccctctagcgggttccgctcccagacctggtcgagggcaagcccgagt
tcttcttcctacaagagaagcttcaacgtcccggtggcgcgagcttacggctcaacggtt
ctgagctccactgacagccttgatttcactcagacgtccatcctcaatggagactacaag
cgctcaaatgagaaggaacaactccagggactcaacgaccgcttcgcgggctacatcgac
aaggtgcactttctggagcagcagaaccagcagatcgaggcggagatccaggcactgcga
cagaagcaggtgtcgcagtctcagctgggcgaactttacgaccaagagctgcaggagttg
cgctccatgctggagcagatccacaacgagaaggcgcagatccaactggacaccgaccac
attgacgtagacatccagcgccttagggaccgcttcgacgaggaagcccgcatcagggaa
gagacggaagcgatcgtccgtgccctgaagaaggacatgggcgactcagcactcgtcaaa
gcagagttggagaagaaagtgcagtccctgcaggacgagatcgcgtttattcgcaacaac
caccaagaggagctcagcgatctgttagcgcaagtgcaggcgtcacagatcaccgtggag
aagagggactaccagaagacggatatcaccgacgcgctgcgtgagattcgctcgcagctg
gagggccactcgacgcaaaacctccagcaggtggaagactggttcgtgtgccgctactcg
aaactcacagaggccgctgagcaaaataaaggcgccatcaaatccgcacgggacgagatc
gcagattatcgccgccagttacagtccaaaaccatcgagttggagtctgtccgaggaacc
aaagagtctctggagaggcagctgaacgacatagaggaccgacacaacaatgacctctcc
agccttcaggaaaccatccaccagctggaaaatgaactcaagagcacgaaatgggagatg
gcacggcatcttcgtgaataccaggacctcttgaatgtcaaaatggcactagatattgag
attgcagcatacagaaaacttcttgaaggagaggagagccactttagcactttcccatat
cgccagaccgtcaccaaaggctccaaggtcaaaagtgagccgcctaaacttaaagtgcaa
cacaaatttgtggaggagatcatcgaggagacgagggtgaaggatgagaagtctgagatg
gatgaggctttggctgagatggcagaggagttgtcagctgccaaagaggaagatgaagga
gaggagaagggagaggctgagggtgaaaaaggtggcgatgaggaaggagagaaaggagag
gaaggtgaaggtgaggtggaagaaggagaggaggaagtggttgcctcaacccaagccaaa
gtagcctctggagcccctgctgaggatgaagaggaaggagagaaagaaggaggtgatgaa
gaacaagaagaagaagctggaaaggttgatgaggaggaagagaagggagaggagggaacg
gagggtgaggaggacaagaaagaagatgatgcagaagatgaagccgaagaaactaagtca
cccaaagcaaaggcctctcctgagagtgagaaagcagaagagaaggaggccagcggagga
gaagaagaaggagaagagggtgatgagaaagatgaggcagatgcaggtagcgacaaagga
tcaacggatgaaaaagaagccgaagcaaaggagcagcctaagaaaacagaaacggcaaag
gaagacaagaagggaaaagaggagaaagaagaggccaaatctgaaaaagacagtgcacct
gtgaaagaaaccaagacggagacgactaaaccagaatctccaaagagtgagagtccaaag
agcgaaagcccaaaggagacacctaagacagagactccaaaaaaggaagcccccaaaagt
gagtctcccaagactgagagtcctaagaaagaggaaccaaaggaagaaccacccaagaaa
gaggcgccaaagtcagaaccaccgaaagctgaaactaaagattccccaaaaccagcagat
gagaaaaagagtgaaccagaaaaaaagcctgacgacaaacagaaagaggcaaccgtgaat
ggagacatggccaagaaagacaagaagaacgagtccgataaggtggtctccaacggagtg
gatgagagcccaaccaaagatgaatcgagccagagggtggtcatcaccaagacggtggag
accatcacgactggggaaggcggagtcaaacaagtcacaaaaactgttaccgtcaccgag
aaaggagaggaggtggacgagagcgtcggggaaaaagtggtctccaaaaccccggagaag
gccgtgaagtccactgaagcagattag
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