Pimephales promelas (fathead minnow): 120490876
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Entry
120490876 CDS
T08155
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03030
DNA replication
pprm03410
Base excision repair
pprm03420
Nucleotide excision repair
pprm03430
Mismatch repair
pprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120490876 (pold3)
03410 Base excision repair
120490876 (pold3)
03420 Nucleotide excision repair
120490876 (pold3)
03430 Mismatch repair
120490876 (pold3)
03440 Homologous recombination
120490876 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120490876 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120490876 (pold3)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120490876 (pold3)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120490876 (pold3)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120490876 (pold3)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120490876 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
120490876 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
TDP-43_C
DUF3386
Motif
Other DBs
NCBI-GeneID:
120490876
NCBI-ProteinID:
XP_039544308
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MDDLYLDNIDEFVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQKRRESSGTPLHATY
LVSGKLVENGSTCHKVSVVREDKLEAVKAKMDVTFSVHVYSVQRAELKDSSPLYSTDYDA
VKENLKNCNKYSAIRCAAAVPMSSVELQRAQEVALVPPVEKEIDKPRINENTSATSKASA
KQPAGIMGMFASKNASKSQESSKEVKTEQKDDSSLVETSKTKPASKANPMSNFFGKPAQK
KVDEKPNKNNKSIKEETDGHSATSSTASVKQPSPKSEYAVKEEQSKESSALKVESKDTRN
RSKRSEVVDSDDEKMEKQLKKRRRIKKPQPDSSDDEVVPDSPPVPTKQAPSPKKQVKKEP
VSHQEISEVKRRKRRRVLKSHTFVDEEGSFVTEKGYVSESYSESEEEPEPKSQAKDSSSL
KQSFGKKEEEKKEKSQKKTSATNKSTKQPSIMGFFQKK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgtatttagacaatattgatgaatttgtgaatgatcaaaataagatcgtc
acttacaaatggctcagtttaactcttggagtccacgtgaacacagcaaaacaaatgttg
tatcattacttggaccagaaacgcagggaaagttcagggactccccttcatgccacctac
cttgtatctgggaagttagttgagaatggtagtacgtgccataaagtgtcagtagtgcgt
gaggacaagcttgaagctgttaaagcaaagatggatgtgacattcagtgtgcatgtctac
agtgtgcagagagcggagctgaaggatagttctccactttacagtacagattatgatgct
gttaaggagaacctaaaaaactgcaacaagtacagtgctatacgctgtgctgcggcagtc
cccatgtcatctgtagaactgcagagagctcaggaggtggctttggtccctccagtggag
aaggaaatcgataaacctcgcataaatgaaaacacttctgctacctcaaaagctagtgct
aagcagccagcaggcatcatgggaatgtttgcaagtaaaaatgcttctaagagtcaagaa
tccagcaaggaagtgaaaacagagcagaaagatgattcttccctggttgaaacctcaaaa
accaaaccggcctccaaagcgaaccctatgagtaacttctttgggaagcctgcccaaaaa
aaggtagatgaaaaacccaacaaaaacaacaaaagcatcaaagaggagaccgacggtcac
tctgcaacatcgagtactgcaagtgtgaaacagccgtctcccaaatcggagtatgccgtt
aaagaggaacaatctaaggagtccagtgctttgaaagttgaatcaaaagacactcggaat
agatcaaagcgttctgaggttgtggacagtgatgatgagaaaatggagaagcagctgaaa
aaaagacggcgtataaagaaaccccagccagacagcagtgatgatgaagttgtgccagat
tctccacctgtgccaaccaaacaggctcccagtcccaaaaaacaagtgaagaaggagcct
gtttcacaccaagagatctcagaggtgaagaggaggaaaagaaggcgtgttttgaagtct
cacacgtttgttgatgaagagggttcctttgtgaccgagaagggttatgtgagtgagtct
tactctgagagtgaagaggagcctgaacccaaaagtcaagccaaggactcaagttcactc
aagcagtcatttggaaaaaaggaggaagagaaaaaagaaaagagtcagaagaagacctct
gccactaacaaatctacaaaacagccatccattatgggatttttccagaagaaatga
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