Pimephales promelas (fathead minnow): 120490888
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Entry
120490888 CDS
T08155
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120490888 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120490888 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120490888 (srsf1b)
Spliceosome [BR:
pprm03041
]
Common components
Common spliceosomal components
SR proteins
120490888 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
TP2
Motif
Other DBs
NCBI-GeneID:
120490888
NCBI-ProteinID:
XP_039544338
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGGGGGGVGAPRGRYGPPS
RRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLD
NTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYS
PRHSRSRSRT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtaattcgagggcctgcagggaacaacgactgtcggatttacgtgggt
aatttaccccccgatattcgcaccaaggacgtagaggatgtgttttataaatacggagcc
attcgggatatcgaccttaaaaacagaagaggaggtccaccgtttgcattcgtggagttc
gaagacccgagagatgctgaggatgctgtatatggacgagatggctatgactatgatggc
tatcgtcttcgagtggagttcccaagaagtggcaggggaggtggaagaggtggaggtggt
ggtggtggtggtggcggcggtggtgttggagctcccagaggcagatatggccctccatcc
aggcgttcggagtacagggtcatagtgtcaggacttcctcctagtggcagctggcaggac
cttaaggatcacatgcgtgaagcaggtgatgtatgttatgctgacgttttccgagatggc
accggcgttgtggagtttgttcgcaaagaagacatgacctacgccgttcgaaagctggat
aacactaagttccggtcacatgagggggagacggcttacatccgcgtaaaggtggatggc
ccgcgcagtcccagttatgggcgctcgcgctcacgcagccgcagcaggagtcgcagcagg
agcaacagccgcagtcgcagctactctccacgccgcagccggggatcaccgcgttactcg
ccccgccacagccgctcccgttcccgcacctaa
DBGET
integrated database retrieval system
