Pimephales promelas (fathead minnow): 120490891
Help
Entry
120490891 CDS
T08155
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
pprm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120490891 (gabra6b)
04082 Neuroactive ligand signaling
120490891 (gabra6b)
04519 Cadherin signaling
120490891 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120490891 (gabra6b)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120490891 (gabra6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120490891
NCBI-ProteinID:
XP_039544342
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MFFLSCVREVLANPPTETRIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSF
GPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSNIWTPDTFFRNGKRSISH
NMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYT
WKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQT
YIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFI
AVCFAFVFSALIEFAAVNYFSTLQANKELRRANLACAAAQAAARSDGEAVSNPLDPGGVL
KKRLNSLSQRDAPDRFSRPPQCDFHQHQHGPTFPANNMLIETSIIDKYSRILFPLSFGAF
NLVYWIVYLTKDTMESREV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctgtcttgtgttagggaggtgttggcaaatccaccgaccgagacaaggatt
tatttggataatattacgcgcattttggataggctgttagatggatatgacaacagactc
cgacctggttttggaggtcccgtcacagaggttaaaacggacatatttgtcaccagcttt
ggtcctgtttctgatgtggaaatggaatacacgatggatgtgttttttcggcaaacgtgg
attgatgaccggctgaaatttgagggccccattgagatcctgcgtctcaacaacctaatg
gtcagcaatatctggacaccggacacgttcttccgaaatggcaaacgttctatttcgcac
aacatgaccactcccaacaagctgttccgcatcatgcagaacggaactattctgtacacc
atgaggttaaccatcaatgcagagtgccccatgcgattgataaatttcccaatggatgga
cattcgtgccctttgaaatttggcagctacgcctatccaatgagtgagattgtgtacaca
tggaagaaaggaccattgttttcagtggaagttcctcaagagagttccagtctgctacag
tacgatctgattggacagacagtgtctagtgagaggttgaagtcaaacacaggtgaatac
atagtcatgacggtttacttccacctgcaaaggaaaatgggtttcttcttgatccaaaca
tacatcccttgcattatgactgtgatcctagcgcaggtctccttctggattgacaaagag
tcagtacctgccagaactgtgtttggcatcaccacagtgctaaccatgaccacgctgagc
atcagtgcccggcattcattaccaaaggtctcctatgccaccgccatggactggttcatc
gccgtctgcttcgcatttgtcttttctgcccttatcgagtttgctgcagtcaactatttc
tccaccttgcaggccaataaggaacttcggcgggccaacttggcctgtgctgcggcccaa
gcagcggccagaagtgatggagaagccgtttcgaatcctctagaccctggaggtgtgttg
aagaaaaggctgaactccctctcccaaagagatgctcctgacaggttctccagaccacct
cagtgtgatttccatcagcatcagcatggtcccactttccctgccaacaacatgctgata
gaaactagtattattgacaagtactcacgtatcctctttcctctgtcctttggggccttc
aacctggtctactggattgtctatctcaccaaagacactatggagtccagggaagtgtga
DBGET
integrated database retrieval system
