Pimephales promelas (fathead minnow): 120490914
Help
Entry
120490914 CDS
T08155
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120490914
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Others
Others
120490914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
120490914
NCBI-ProteinID:
XP_039544365
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MERGIRYCRVNVSAFCTLLLVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMESGVDSG
KVSGENGDGSTALFNSAGAETAQPDCGATEHGEHAHSGLKRNTDRLLSEKTPPDDKRKSV
RSNCKVYNLKREGSQGSAPGDHHHRVRRSTQGPGSPAGARSAPTVGNSTAPAARRVPRSE
PRWSREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLG
SVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSD
EGATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYW
SKLGLDKEPGLIHLETTISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFV
QVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYV
SESGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKINNEVKTHITYNKGRD
WRLLQAPSADLRGNRIHCILPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAE
LTSSNVSMFITPDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGKVW
NKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVS
WDLHDQGERCLMGVKRVYRKLKSIARCVMGKTYSVTMISQPCDCTESDFECDYGFERRTD
GKCTPAFWFSPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAPRG
LHLVTSEGKLTATLASNVTLLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIY
KNVGIYRVSATAENSLGSETVLLFLHITSGHLESVHLSAPFVAVKNKEVNLTVVLWPSQV
GTVTYIWWFGNNSEPVITLEGSVAFTFSQEGISVVTVQVSAGNNILQDRKTVAVHEYFRS
HLLAFSSNLDDHNPDVSEWRLDVSRVIKTSMVQATGVNPEQLLVTVLPGLPTTAEFFLLP
DKHLTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSEN
HSGSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHIYAAMQDEKEQEMIQSPVSPTDSTPSC
SSQRELLTPLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggagagggggatcagatattgccgggttaatgtcagtgctttctgcaccctgcttttg
gttttgttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctg
ctggataagtggagcggtcgggaattactggtgaggatggagagtggtgtcgactctggt
aaagttagtggggaaaatggagacgggtcaacggcgctgtttaattcggctggtgctgaa
actgctcagcccgactgcggagcaaccgaacacggcgaacacgctcactctgggcttaaa
aggaatacagacaggcttctctcagagaaaacgcctccagatgataaacggaagtcggtt
cgcagtaattgcaaagtttataatctcaaacgggaaggttctcaaggttcagcccctgga
gatcaccatcaccgagtgcgtagaagcacccagggacccggctcgcccgcaggtgcgcgc
tctgcgccgactgttggcaacagcaccgcgccagctgcgcgccgagtcccccgctctgag
ccgaggtggagcagggaagagcggagaacggccacttcacgacaggaggagctgaaactt
accagctctacatttgcactgacaggggattccgctcacaaccaagccatggtgcactgg
tccggccaaaacagcagcgtgatcctaatgctgaccaaactgtacgacttcaatctggga
agtgtcacggaaagctctttatggaggtcaacagattacggaaccacttatgagaaactc
aatgaaaaggtgggcgtgaagaccatcctcagctatctgtacgtcagccccaacaacaag
cgcaagatcatgttgctgacagatccagaggtggagagcagtttgctcatcagctcagat
gaaggcgccacctatcaaaaataccgtctcaacttctacatcctcagcctgttgttccat
cctgagcaggaggactggatccttgcttatggccacgaccagaagctctacagctctgtt
gagtttggccgtcgatggcagcttgttcacgagcgggtggcgcccaatcgattctactgg
tctaaactgggccttgataaagagccgggcctgattcaccttgagaccaccatctcagaa
acacaggccctgtatgtcacatgtaaacttcagaactgcacagatgccaacaagggcaaa
ccttttcctggatacattgaccccaactccctggtggtccaagatgagtatgtgtttgtc
caggtgtcgaccggtggtcggccaatctactatgtgtcatccaggcgagatgtgtttaca
cccatgaagcttcccaaatacacccttccaaaggatctgcatgtgatcagtacagatgag
aaccgggtcgtggcggcggttcaagagtggaaccagaatgacacttacaacctgtatgtg
tcagagtccggaggcatttactacacactggctttggagaacgtcatgagcagtatgggt
ccagagggaaatgtcatgatagatctatacgaggtggcagggataaaaggcatgttcctg
gccaacaagaagataaataatgaggtgaagacacatataacctataataaaggccgagac
tggaggctcctgcaggctccttcagctgatctcagagggaaccgcatccattgcatactg
ccgtactgttccctgcatcttcacctgcatgtatcagcaaacccgtacacatctggaaat
atagccagcagagagtcggctcctggaatcatagtggcatcaggttcaatcggcgcggag
ttaacgagcagcaacgttagcatgttcatcacacccgacgctggaaacacgtggcggcag
atatttgatgaagagtacagtgttctgtatctggaccaaggaggagctttagtagctatt
cgacacacccctcttcccatcaggcacctctggttgagttttgatgaggggaaagtgtgg
aacaaatacagtttcacttcatctcccctgtttgtggacggggtcttaggcgaaccaggc
gaggagacgctcattatgacgatcttcggtcatgtcagtcaccgctcagaatggcagctg
gtaaagatagacttcaggtctatctttaacagaagatgcatagagtctgactatgtctcg
tgggatttacacgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaag
ctgaagtccatagcaaggtgtgttatgggtaaaacctactccgtcacgatgatttcccag
ccgtgtgactgcactgagtcggactttgaatgtgattatggtttcgagagaaggactgat
gggaaatgtactccagcattctggttctccccctcctccatgtctcggacctgcaccaca
gaacacacgttcctcaacagcactgggtacagaaaggtggtgtctaacaactgcaccggt
ggggtaatggagcagtacacggctcgtaggcagctgtgccctagccaggcccctcgcggc
ctccacttagtgaccagcgaagggaagctaacagctactctggccagcaacgtcacctta
cttgtgttcctggaggagggtgatggatctaaaaccagcatcacggtggatttcggtgat
ggaaacgccttcacctactccaacgtgagctctattgaagatggcattaaacacatctac
aagaacgtgggaatctaccgagtgtcagccacggcggaaaacagtctgggctctgaaact
gtgctcctcttcctacacattacatcaggtcatctggaatctgttcatctctccgcccct
tttgtcgctgtgaaaaataaagaagtcaatctgacggtggttctctggcctagccaagtg
ggaacagtcacctatatctggtggtttgggaataattcagagcccgtgatcacgctggag
gggagtgtggcgttcacattctctcaagagggaatcagtgttgtcactgtgcaggtttcc
gccgggaataacatcctacaagacaggaaaactgttgctgtccatgaatacttcagatct
catcttcttgccttttcatccaatctggatgatcacaaccctgatgtgtccgaatggagg
cttgatgtgagtcgagtcattaaaacctctatggtgcaggcgacaggagtgaatcctgaa
cagctgttggtcactgtgttgcctggacttcccacaacggccgagttcttcctgttaccg
gacaaacacctgacagagggcaagccagacaaaacagccactcatttagaccagctctca
gaactggtgctcagtgctctgaatcagaatctggttcagttcacactcagaccaggagtc
caggtcacggtatacgctgctcatttatcagcagcgcctctagtggacacaagcgagaat
cacagcggctcagctatgctcatgctcctctctgtggtggtggtgggtttagcagtgttc
ctcatctataaattcaaaaggaagatcccaggcctccacatctatgcagcgatgcaggac
gaaaaagagcaagaaatgatccagagtccagtttctcccactgacagcacacccagctgc
agttctcagagagagctgctcacaccactggaacctctggacacagagcccaacacccag
accatcgaatgcatcaaacctcatccacgcgtcaaattctcatcagatcttcctacgtac
atcgacgtttga
DBGET
integrated database retrieval system
