Pimephales promelas (fathead minnow): 120490949
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Entry
120490949 CDS
T08155
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120490949 (irx6a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120490949 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120490949
NCBI-ProteinID:
XP_039544416
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVTEGSSASQTAASFCCPSYE
NRLLASTRTELNAALGMYGSPYAAAAAAAGQNYANYFPYSADPSAIYSSLNPQYEIKEGS
GSLHGTITQPAAYYPYDHSLGQYQYDRYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKEELNKSDP
DNITKDSKDSKDEQDLQFSDLDDMEDEDCDKLDSDCEKSGQDDLPTSSPPKRDCNPDLPL
HSNFPSFPCGLKSLGPLNPDYLDPLGSKRQQQQHSPQSTSINTVTLSHFEPSEKPRIWSL
ARTAVAGVVLGTQNSGDVRTGPVDCQMQALRLPTVEGVQCGELKGLQDPTNLSNTESLYQ
EGLQGIHKAYNSGSYKTLQLHSSSYPGLTESCQYSSIEGFPSAGKTEIESSELNDTCPTI
QKTTAFRPVMKR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctctcagtttggatatccttacaatgcaact
tctcagttcttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtgacggaaggatcgagcgcgtctcagaccgcagcctccttctgctgtccctcctatgag
aaccggctgcttgcgagcacgcggacagagctcaacgccgcgctcgggatgtacggctct
ccttacgcagcagcagcggcggcagccgggcagaactacgccaactactttccgtacagc
gccgacccctctgccatctactccagcctgaacccacaatatgaaatcaaagaggggtca
ggcagtcttcatggcactataacccaacctgccgcctactatccatatgaccactcactc
ggccagtaccagtacgacaggtatgggacagttgattttaatgggtcaacacggagaaaa
aatgccacgcgtgagacaacgagcactcttaaaacatggctttatgaacaccggaagaac
ccataccctacaaagggtgagaagatcatgctggccattatcaccaaaatgactctcacg
caagtgtctacctggtttgccaatgctaggagaagactaaagaaagaaaacaaaatgacc
tggtcccctaaaaacaaagcaggcgatgacaggaaggaagagcttaataagagtgaccca
gacaacattaccaaagattccaaagacagtaaggatgagcaggacctgcagttcagtgac
ctggatgacatggaggacgaggactgtgacaagctggacagtgactgtgagaaatcaggt
caggatgacctcccgacttcctcccctccaaagagagactgtaaccctgaccttcctctt
cactcgaacttcccatcttttccctgtggtctaaagagtttggggcctctgaaccctgat
tacctggatcctttgggatccaaacgacagcaacaacagcactcacctcagtccacctcc
atcaacactgtgacactctctcactttgagccatcggaaaagcctcggatctggtcgctg
gcgcgtacagccgtcgcaggcgttgtgttaggcacgcagaacagtggggatgtacggact
gggcccgtggactgtcagatgcaggcactaaggctccccacagtcgaaggggtgcagtgt
ggggagctgaagggccttcaggaccctacaaacctcagcaatactgaaagcctttaccaa
gaaggactgcaggggatacacaaggcatacaatagcgggagctacaagacccttcaactt
cactcttcatcctatcctggactgacagaatcctgccaatactcctcaatagaaggattt
cccagtgcaggaaagacagagatagaatcaagtgagctcaatgacacgtgtccaacaatc
cagaagaccactgcattcagacccgtgatgaagaggtga
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integrated database retrieval system
