Pimephales promelas (fathead minnow): 120490993
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Entry
120490993 CDS
T08155
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120490993 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120490993 (puf60b)
Spliceosome [BR:
pprm03041
]
Complex A
U2 snRNP components
U2 related factors
120490993 (puf60b)
Complex B
120490993 (puf60b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
120490993
NCBI-ProteinID:
XP_039544475
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MMENGQGTGAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSSLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA
RAFNRIYVASIHPDLSDEDIKSVFEAFGKIKSCMLVREPTTGKHKGYGFIEYDKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPMPLLTPMTPGGLPPAAAVAAAAATAKITAQEAVAGS
VLGSLTSPAHILSQQMGLPQAVLAAQAPGIITGVTPARPTLPVVPQVGLVNPVLASPPVT
SASVGTPTSTAQTHTEVKREEDNRRPEDLSAPVGNGQDSELEQLSVSASGGKQTVILSKS
TVMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQERQGEEDDAEIIVKIFVEFSD
AGEMNKAIQALNNRWFAGRKVVAELYDQERFNNSDLTA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatggacaaggcacaggtgcaaagcttggattaccgcctcttactccggag
cagcaggaggcgctacagaaggctaagaagtatgcaatggaacagagcatcaagagtgtt
ttagtgaaacagaccatcgcccaccagcaacagcagctcactaacttacagatggcagca
gtgacaatgggctttggagatcctctctcatctttacaatcggtggcagcacagaggcag
agagctctggccatcatgtgtcgtgtgtatgtgggctccatttattacgagctgggggag
gataccatccggcaggccttcgccccctttggtcccattaagagcattgatatgtcctgg
gactctgtcacgatgaaacacaagggctttgcctttgttgagtatgaagttcctgaagca
gctcagctggccttggagcagatgaactcagtcatgctgggtgggaggaacattaaggtg
gggcggccaagtaacattggacaggcgcagcctatcattgaccaactggcagaggaggca
cgtgccttcaaccgaatctatgttgcctctatccaccctgatctatctgacgaggacatc
aagagcgtctttgaggccttcggaaagattaaaagttgcatgctggtgcgggaacccacc
acaggaaagcacaagggctatggatttattgagtacgacaagcctcagtcatcgctggat
gccgtctcttctatgaacctgtttgaccttggaggtcagtacctaagagtggggaaggct
gttacccctcccatgcctctcttgacacctatgacccctggaggtctgccccctgctgca
gctgtggcggctgctgctgccaccgccaagatcactgctcaggaggctgttgctgggtca
gtgctgggttctcttacgtcaccagcacacattctcagtcagcaaatgggacttccacag
gctgtactggctgcccaggcccctggcatcatcacaggtgtgacacctgctcgccccact
ctccctgtagtcccccaggttggtttggtcaacccagtactagcatccccaccagtcaca
tctgcttctgtgggaacaccaacatctacagctcaaacacatacagaagtcaagagagag
gaagacaacaggcggcctgaagatctgagtgcgcccgttggaaatggacaggacagtgaa
ctggagcagctaagtgtcagtgcaagtggaggaaaacaaacggtcatactgtcaaagtca
acagttatggtgctacgcaacatggtgggccccgaggacattgacgatgacctggaaggc
gaagtgatggaggaatgtgggaagtacggtgctgttaatcgggttatcatataccaggaa
cgacagggtgaggaggacgatgctgagataatagtgaagatcttcgtagagttctctgat
gctggtgaaatgaacaaggccatccaagctctcaacaaccgctggtttgcaggtcgcaag
gttgttgccgagttgtacgatcaagagcgttttaataacagtgacctcactgcataa
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