Pimephales promelas (fathead minnow): 120490998
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Entry
120490998 CDS
T08155
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120490998 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120490998 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120490998 (shha)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C46: hedgehog family
120490998 (shha)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Morphogens
120490998 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DHQS
Peptidase_M15_3
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
120490998
NCBI-ProteinID:
XP_039544484
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MRLLTRELLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSLVTLKDGGQKAVKDLKPGDKVLAADSGGNLVYSDFIM
FTDRDSATRRMFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHTMTAAYASSVRAGQRVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHGLAHLAFAPV
RLYYDVTSVLFPKNLISESSATLQQEGVHWYSKLLYRVGTWLLDSHMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttttgacgagagagctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtccaggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagactttaggggccagcggc
agatacgagggcaagataacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggacaggctcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaaatatgggaca
ctctctcggttagctgtagaagctggatttgactgggtctattatgaatccaaagcgcac
atccattgttctgtcaaagcagaaaattcggttgctgcaaaatctggaggctgcttccca
ggttcgtctctggtcacgctcaaagacggagggcagaaggccgtgaaggacctgaaaccc
ggcgacaaggtgctggcggcggacagcggtgggaacctcgtctacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgtatgttttacgtcatagaaacgaaagaaccc
gttgaaaagatcacactcaccgctgctcatctcctttttgtcctcgacaactcaacggat
gatctccacaccatgaccgccgcgtatgccagcagtgtcagggccggacaaagggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggagcggatatacacggaggag
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggttgacagaatactg
gcgtcctgttacgccgtaatagaggaccacgggctcgcgcatttggccttcgcgcccgtc
aggctctattatgatgtgacatcagtcctattccctaaaaacttaatcagtgagtccagt
gcgactttacaacaggagggagtccactggtactccaagctcctctatcgagtggggacg
tggcttttggacagtcacatgctccatcctttggggatgtcagtaaactcaagctga
DBGET
integrated database retrieval system