Pimephales promelas (fathead minnow): 120491010
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Entry
120491010 CDS
T08155
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120491010 (irx5a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120491010 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
120491010
NCBI-ProteinID:
XP_039544499
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSASVISGPRTDELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLINPGEIPCDRFKDETHAKDL
DPPLTDSELKDTEERTDLLAEQAKPTTSSPPVLQRGSDLITQEKPTEPGHAASTVNSNVT
SVIHSPPSAPKPKLWSLAEIATSSDRCKGSSEAPQAAGLGQSTVIASAASPSRSSPQCPL
PNNTVLSRPIYYTSPFYPGYTNYSTFGHLHSSHGTNTSSTAHFNGLSQTVLNRAEALVRE
SKVRSQTQVDLCKDSPYELKKGMSNI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccgtccgcctctttggcactctattcctgt
cctgcctacagtgcaagcgtgatatcaggaccccggacagacgagctagggagatcttcc
tctggctcagctttcgctccctatgccggatctacagcgttcaccagcgcctcgccaggc
tacaattcccatctcccgtacagtgctgatgcggccgccgccgccactttcacttcttat
gtgagctccccgtatgaccacacaacaggcatggccggatctataggctatcatccttac
gctgctcccttaggctcgtacccgtatggagacccagcttaccgcaagaatgctacccgg
gacgccacagccactttgaaagcttggcttagcgagcaccggaaaaacccgtaccccacc
aaaggcgaaaagatcatgctggccatcatcactaagatgaccctcactcaagtgtccacc
tggttcgccaatgccaggcggaggctaaagaaggagaacaagatgacctggaccccacgg
aaccggagcgaggatgaggaagaggacgaaaacattgatctagagaaaaacgacgacgac
gagccaaacaagcccacggacaagggagactccacagacacagaggcagatcataaactc
atcaaccctggggagataccatgcgacagatttaaagacgagactcatgctaaagatctt
gatccacctttgacagactcggaattaaaagacacagaggagcggacggatttgctcgca
gagcaagcgaaaccaaccacctcctctccccccgtcctacagagagggagtgatctcatt
acgcaagaaaagcccacagaaccgggccacgccgcgagcacggttaacagcaacgtaacg
tctgttattcattctcccccttcggcgcccaaacccaaactctggtctctggccgagatc
gccacgtcttcggacaggtgcaaagggagcagtgaggctccacaggccgcaggactgggt
caaagcacagtcatagccagtgcggcctcgccgagccgttcctcccctcagtgccctctc
cctaataacactgtcctttctcggcctatttactacacgtcccctttttacccgggttac
acgaactatagcactttcggacacctccacagcagccacggcaccaacaccagctcaacg
gcacatttcaatggattaagccagactgttttaaacagagccgaggctctggtaagagag
agcaaagtaagaagccaaacacaggtagatctttgtaaagactcaccttatgagctaaag
aaaggtatgtcaaacatttaa
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