Pimephales promelas (fathead minnow): 120491057
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Entry
120491057 CDS
T08155
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120491057 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120491057 (copb1)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120491057 (copb1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120491057 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT
HEAT_2
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
120491057
NCBI-ProteinID:
XP_039544571
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSSKEDIQSVMTEVR
RSLGEIPIVENELKKESGEVKPEEEMSATPAPKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVALAEDKKRQNSFVAEAMLFMATVLHLGKSSL
PKKPITDDDVERISLCLKVLSECSPLMNDIFNKECRRSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKSEMASKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLSEYLQHILGSTNMKCLTPEKALSGICGFMAANLYARSI
FGEDALANVSIEKPIHMGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKSHS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcggagaatgtgtgttataccctcatcaatgtcaccaatgactctgaacca
ccatcggaagtcagcttaaaaactgatttagaaaagggagaaatcaaagccaagacagag
gctttgaagaaggtcatcatcatgatcctgaatggagagaaactgcctggcctgttaatg
accatcatccggtttgtgctgcctctgcaggaccacacaattaagaaactactcctagtt
ttttgggagattgttcccaaaactacccctgatggcaaacttcttcaggagatgatcttg
gtctgtgatgcctacaggaaggatctccagcatcccaatgagttcatccgtggctctacc
ctgcgcttcctgtgcaagctgaaggaatctgagctgctggagccccttatgccagcgatc
cgcgcctgtctggaacaccgccacagctacgtacgacgcaatgcagtcctggccatctac
actatctacaggaactttgagcatttgatcccagatgctcctgagctgattcatgatttc
cttgtaaatgagaaagatgcaagctgcaagagaaatgcgtttatgatgctgattcatgca
gatcaggacagagctttggactacctaagcacatgtattgatcaggtgcatacgttcgga
gacattctacagctcgtcattgtggaactaatttataaggtctgccatgccaacccctca
gagagagctcgtttcatccgttgtatatacaacctgctgcagtcatccagtcctgctgtg
aaatatgaagcagctggaactctggttactctgtccagtgctcccactgccatcaaggct
gctgctcagtgctacattgatctgatcattaaagagagcgacaacaacgttaaactcatt
gttctggaccggctgattgagctgaaggaacaccccacacatgagcgtgtgctgcaggac
cttgtgatggatattctgagggttttgacaactcccgatcttgaggtccgcaagaagacc
ctacagctcgccttggacttggtgtcttcccgcaatgtagaggagctggttatagtgcta
aagaaagaagtcatcaaaaccaacaatgtgacggagcatgaagacacagacaagtacagg
cagctgcttgttcgcactctccactcgtgtagtgtgcgcttccctgacatggcagccaat
gtcatccctgtgctgatggagttcctgagtgacactaatgaggcggccgcagccgatgtg
ctggagtttgtgcgtgaggcgattcagaggtttgacaaccttagacctctcatcattgag
aagatgctggaggttttccacgccatcaagacggtcaagatttacagaggagctctgtgg
attttgggtgaatattgcagctctaaagaggacatccagagtgtcatgacagaagtccgt
agatctttgggagagataccaatcgtggagaatgaattgaagaaggagtctggagaggtg
aaacctgaggaagagatgagcgcaactccagctcctaagctggtgacagaaatgggcacc
tacgtcactcagagtgccctgagtagcagcaggccatccaagaaagaagaggacaggcct
cctctaaggggtttcctgatggatggagacttttacgttgctgcctccttggccaccacc
ctcaccaaagtggccctgcgctatgttgcccttgccgaggacaaaaaaagacaaaattcc
tttgtggcagaggccatgctgttcatggccactgtgctccatctgggcaagtcgtctcta
cccaagaagcccatcaccgatgatgacgtggaacggatctcgctgtgccttaaagtcctg
tccgaatgctcgcccctcatgaacgacatctttaataaagagtgccgcagatccctgtcc
catatgctcactgtcagactggaggaagagaaactgtctcagaagaaagagtctgagaag
cgtaacgtgactgttcaggcggatgatccgatctccttcatgcagctgaccgctaagagc
gagatggcatccaaagaagatcaattccaactcagtctgctggcggcgatgggcaatact
cagaggaaagaagccgcagaccctctggcttctaaacttaataaggtcacccaattgact
ggtttctcagatccagtgtacgcagaagcttacgtacatgtcaatcagtatgatatcgtc
ctggatgtcctggttgttaaccagactagcgacaccctacagaactgtaccttggagctg
gcaacacttggtgatcttaaattggttgagaaaccatctcctctcacattggctccacac
gactttgccaacatcaaagctaatgtgaaagtggcctccacagagaatggcatcatattt
ggaaacatagtatatgatgtatctggagcagccagtgaccgaaattgcgtagttctcagc
gacattcacattgacatcatggactacattcagccagcttcctgcacagatgctgagttt
agacagatgtgggctgaatttgagtgggaaaataaggttaccgtcaacaccaacatcaca
gatctgagcgagtatctccaacacattcttgggtccaccaacatgaagtgcttgacccca
gagaaggccctgtccggtatctgtggctttatggcagcaaatctgtatgctcgctctata
tttggagaggatgcccttgcaaacgtaagcatcgagaaaccaatccacatgggacctgat
gccccagtcaatggacatattcgcatccgagccaaaagccagggtatggctttgagtctg
ggtgataagatcaacctctctcagaagaagtctcactcgtaa
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integrated database retrieval system
