Pimephales promelas (fathead minnow): 120491059
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Entry
120491059 CDS
T08155
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120491059 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120491059 (dis3l)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120491059 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
C2_SHIP1-2_2nd
Motif
Other DBs
NCBI-GeneID:
120491059
NCBI-ProteinID:
XP_039544574
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MHNPVLIKTEKVLHLNSSKGRKVRVVREHYVREQVPCGSSFCQANCHNVGKVLSSDVTHY
VVPDVGVVRDFLEILEFRELQGIVLTQTAYQTVQHTRGRRHYNRLSALLKDPRHDCVMFA
NEFQQYSYCPRDKGESQDKWQTRKVYNAAVWYYNHLAGLRPVVMITEDSNTISEYSALNS
GVYVISTQEYLLSFCPDLQAAHDLYISIAQTLQERESVGAEKVYSEHLPAEVLEAGIKSG
RYIQGNLSVNKHRAQHEAFVRYEGSASKNTELNSDVLISGAKHRNRAVHGDVVVIELLPR
NEWKGRTMALTEGQGEERAQEDTQSQPLPTGRVVGILQRNWRDYVVTFPPLEEVQSQSRN
SQKILVIPWDYRIPKIRISTQQAEALQDQRVIVRLDSWESTSVYPNGHCVRVLGKAGELE
TEIQTILVENCIHVPPFSEAQLREMPVNTDENPWQMDSSEVSSRRDLRETHLVFSIDPKG
CEDVDDTLSVRILPGGKRLELGVHIADVTHFVKEGSLTDLEARSRATTYYLADRRYDMLP
AVLSADLCSLLGGVDRYAMSVLWELDAESLNLCTVWYGRTLIRSSYQLYYELAQSLLNGE
EVEVPELGQLKSSQRDQKLAELLLALETLTRVARHLRAQRDKGGALELEGVEVRAQLDED
KNITALVPKQPLEVHETVAECMIFANHWVARKIQESFPHQALLRHHPPPKQEFFNQLIDS
AKARGFSIDTRSNRALADSLERAVDPQDPLVNRLLKMMATQAMSNALYFSTGACPEEQYY
HYGLALDRYTHFTSPIRRYADVLVHRLLMAAVQPEKEGSLSKALASNKELEELAQQINNK
NRAAQHAQKQSTELFQCLYFRDKDSNTDERCVADAVIYGVRANGFLAFVPQYGLKGAVYL
KNREGHVVSVDEDGRCEWKAGTLQRYPDRISTCTSTGTHTFYLFDHITVRISVEPSRCHA
DSLCLQLIRNKPHCAVQPESQPAGRGRSELVQEVVRWAEEASLQAEEEKGRKSKLSREER
KFRQSRTPNLYVLLQEVSELALLDLSLCQIRNTEEQTCIASS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatccggtcttgattaaaaccgagaaggttttacatttgaacagctcaaagggt
agaaaggtccgagtggttcgggagcattatgtgagggaacaggtgccgtgtggaagctcc
ttctgtcaagcgaactgtcacaacgttgggaaggttctgtctagtgacgtgacccactat
gtggttccggatgtgggagtggttcgggattttctggagatactggagttcagggagctg
caggggatcgttttgacccagacagcgtaccagactgttcagcacactcgtggacgcagg
cactataacagactgagtgctttactgaaggaccctcgccacgattgtgtgatgtttgcc
aatgagtttcagcagtattcatactgccccagagacaagggtgagtctcaggacaaatgg
caaacgagaaaagtgtataatgcagcagtttggtactataatcatctggctggactccgc
ccagtggtcatgattaccgaagatagtaacactatttcagaatatagtgccttaaacagt
ggagtctatgtcatctcaactcaggagtacctgttaagtttctgtccggacctgcaggcc
gcccatgatctgtacatctccattgctcagacccttcaagagcgagagagtgtgggagca
gagaaggtgtactctgaacacctgcctgcggaggtgctggaggctggtataaaatctgga
aggtacatccagggcaacctcagtgtgaacaaacatcgagcgcagcatgaagcctttgtc
cgttatgagggttcagccagcaaaaacacagagctaaacagtgatgtgctgatcagtgga
gcaaagcatcgtaaccgggcggtgcatggagatgtggttgtcatagagctgttaccccgt
aatgagtggaagggcaggactatggcgcttacagaaggtcagggggaggagcgggcacaa
gaggacacccagagtcagcccttgcccacaggccgggtggtgggtattctgcagaggaac
tggagagactacgttgtgacatttccccctctcgaggaggtgcagtcccagagccgaaat
tcacagaagattctggtcattccgtgggactaccgcatacctaaaatccgtatcagcaca
cagcaggctgaggcactgcaggaccaaagagtaattgtgcgtctggattcatgggagagt
acttctgtctacccaaatggtcattgtgtgagggttctggggaaagcaggtgagctggag
actgagattcagaccattctggtggagaactgcatccatgtgccaccattctcagaggca
cagttgcgagagatgccggttaacacagacgagaacccttggcagatggacagcagtgag
gtgtcatctcgacgggacctgagagagacacatctagtgttcagtatcgatcctaagggc
tgtgaggacgtggatgacaccttgtctgtacggattttacctggggggaaacgtttagag
ctgggtgtccacattgctgatgtcactcactttgtcaaggagggctctcttacagaccta
gaggcacggtccagggcaaccacttactaccttgctgaccggaggtatgacatgctgcca
gcggtgttgagtgctgacctgtgctccctccttggaggagttgaccgatatgccatgagt
gtgctgtgggagctggatgctgagtctctgaatctgtgtacggtttggtacggtcgcact
cttattcgctcctcgtatcagctttactatgagctggcccagagccttctgaatggcgag
gaggtcgaggtgcctgagctaggccagcttaagagttcgcagcgggaccagaaactggct
gagctcttgctggccctggagactctgacgagggtagccaggcacctccgggcacagaga
gataagggtggtgccctggagttggagggggtggaggttagggctcagctggatgaagat
aagaacattacagcccttgtgcccaaacaacctctggaggtccatgagactgtggctgag
tgcatgatcttcgccaaccactgggtggcacgcaagatacaggagagctttccacatcaa
gctcttctgcgtcatcacccaccacccaaacaggagttcttcaatcagctaatcgacagt
gccaaagcccgtggcttcagtattgatacgaggtcaaacagggctctggctgattctctg
gagcgagctgtggatcctcaggaccccctggtgaacaggttattgaaaatgatggccaca
caggcaatgtctaatgccctttacttctctacaggagcctgtcctgaggaacagtactat
cactatgggcttgcactggatcgatacactcactttacctctccaatcagacgctatgct
gatgtattagttcaccggctgctcatggctgccgttcagccggaaaaggaaggatcacta
agcaaagctttggccagtaacaaagaacttgaggagctggctcaacaaatcaacaataaa
aacagagcagcgcagcacgcacagaagcagtccacagagctcttccagtgcctctacttt
agagataaagactccaacacagatgagcgctgtgtggctgatgcagtgatctatggtgtc
cgagctaatggttttcttgccttcgtaccacagtatggtttgaagggagctgtgtacctt
aagaatcgagagggtcatgtggtcagcgtcgatgaagatggaagatgcgagtggaaggct
gggacattgcagagataccctgacaggatcagtacctgtaccagcactggaactcatacc
ttttacctcttcgaccacattacagttcgtatctctgtagaaccatctcgttgccatgcc
gacagcttgtgtctgcagcttatcaggaacaagcctcattgcgccgtgcaacctgagtcc
cagccagctggtcgaggtcggtctgagctggttcaggaagtggtgcgctgggcagaagag
gcctctctccaggcagaggaagagaaagggaggaagtccaaactgagcagggaggagagg
aagttcagacagagcagaacaccaaacctctatgtcctgttacaggaggtcagtgaactt
gccctgctggatctgtctttatgccaaatcagaaatactgaggaacagacttgtattgca
tcttcttag
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