Pimephales promelas (fathead minnow): 120491179
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Entry
120491179 CDS
T08155
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120491179 (khdc4)
Spliceosome [BR:
pprm03041
]
Complex B
Other components
Prp19-related factors
120491179 (khdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
DUF7104
Motif
Other DBs
NCBI-GeneID:
120491179
NCBI-ProteinID:
XP_039544757
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MSFGVPHSAGRRSKWDQAGPGSSGSSDGGSAPTGALDAAAAVAAKINAMLVAKGKLKPSQ
INSAAPADKVSGAAASKLKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRVSGAAVSTR
GRYMSSEEKSKALPSDRPLYLHVQGQTRDLVDKAVNRIKEIITNGVVKAATNSTYSGATV
TVYQQPGSTTLPTIPSAAHKPHYTGGMHYVQDKVFVGLDQALHGFSVKECVEGPGCSYLQ
HIQAETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKTLCENLLQTVHA
EYSRFLNQMSSVMPTQGFLQPPAMNGMPPQSQYYPHPPAGFQPYPVPVPPQPVAPPYPVS
PAAPGPAPPAQYPLAPASVPAQTLPPAQFPPPAMAPPSLSAPPRPVAPPRPVAPPLPPQK
RRFTEEVPDESEQGLLGYQHGPIHMTNLGAGMSVGSPEPSGPPSAASSGPVRERDSSRTI
MPCVSAPLNGLRSQKADEKTAPPSLLEPQVKRARAGLVAYAGDSSDEEDDHGASKGYTYL
SPSPHRPKTHTHTHTPQPFWMAP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcggtgtccctcacagcgccgggcggcgcagtaagtgggaccaggccggcccg
ggttcctcgggttcctctgatggaggttctgctcccaccggagctctggacgccgcggcc
gctgtcgccgctaagatcaacgctatgctcgtggctaaagggaaactcaagccgtctcag
atcaacagcgccgctccggctgataaagtttcaggtgcggcggcgagtaaactgaaggac
gatctggtggtggcagaagtggagatcaacgacgtcccgctgacctgccgaaacctgctg
acccgcggacagactcaagacgagatcagcagagtgagtggcgctgctgtgtccaccagg
gggcgctacatgtcctcagaggagaagagcaaagccctgcccagtgaccgtccgctgtat
ctgcatgttcagggccagacccgagacctagtggacaaggccgttaacaggattaaggag
atcatcactaacggtgtggtgaaggccgccaccaactcgacctacagcggagcgacggtc
actgtgtaccagcagcccggatccaccactttacccacaatcccctctgctgcacacaaa
ccacactatacaggcggcatgcactatgtgcaggataaggtgttcgtggggctggaccag
gcgctgcacggtttcagtgtgaaggagtgtgtggagggtccgggctgctcgtatcttcag
cacattcaggcagagacgggagccaaagtgttcctgcgggggaaagggtcggggtgtctg
gagccggcgtcagggcgggaggcgttcgagcccatgtacatatacatcagtcacccaaaa
ccagaaggactcgctgctgcaaaaaccctctgtgaaaacctcctgcagaccgttcatgct
gagtattctagattcctgaatcagatgagcagtgtgatgcccactcagggttttctccag
cctcctgctatgaacgggatgcctcctcagtctcagtattatcctcatcctcccgccgga
ttccagccgtatccggttcctgttcctccgcagcccgtcgctcctccgtatccggtgtct
cccgcggccccggggcccgccccccccgcgcagtatcccctcgcgcccgctagcgtcccg
gcacagactcttcctccagctcagttcccgccccctgccatggctccaccctcactctca
gctcctcccagacccgtggctccacccagacctgtggctccgcccctcccgccacagaag
cgccgcttcaccgaggaggtgccggacgagtcggagcaaggccttctgggataccagcat
ggacccattcatatgactaatttaggtgcaggcatgtctgtgggcagcccagagccgtca
ggacccccgtctgctgcttcctcagggcctgtgagagagagagacagcagcagaacgatc
atgccgtgtgtgtcagcgccgctcaacggactgagatctcagaaagcagacgaaaagacg
gcgccgccgagccttctggagccgcaggtgaagcgggcccgggccgggctggtggcgtac
gccggagattcctcggatgaagaggacgatcacggagcctccaaaggatatacgtacctc
tcgccttctcctcaccggcccaaaacacacacacacacacacacgccgcagcccttctgg
atggcaccgtag
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