Pimephales promelas (fathead minnow): 120491320
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Entry
120491320 CDS
T08155
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120491320
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120491320
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120491320
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120491320
Cell adhesion molecules [BR:
pprm04515
]
Cadherins
Protocadherins
120491320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Cadherin_4
EphA2_TM
V_ATPase_I
UTP20_C
DUF6377
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
120491320
NCBI-ProteinID:
XP_039544997
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMYSATGASS
NLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRR
LFALNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPINGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIDKDVPFHLKAVYDNQFLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPVSAIPGSVVAEVFAVDGDTGMNAELKYTIVSCK
REGLFRIDPVTGNITLEQKPSPVDFGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
SYIHDLIRRKMETPLDRNIGESRETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRHA
SQFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GTISLPAELEEPGIGRFDWNSTPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQGTLTRART
ELNPDYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSVPLL
SHPLPLVQAQDDFYEQTSPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPSLSSYPSPKSPVSSFNNQKEWAKERLLNGHTLTRSWKGERGSQEQFGDRKTYGS
SEGHFGSGGHMADIPLASLKSYQPASGHDSPKEQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatccg
accattgcccaagagctcatttaccctattcgagaagagctacaggagaatgttcttatt
ggaaacataccaaaggacttgaacatctcccatatgtactctgccaccggagctagcagt
aatttggtttaccggcttgtttctaaagcaggtgacaccccgctgctccgagtgatgagc
aacacaggagagatttttaccacctccaaccgtatagatagggagaaactctgtcctggc
ccctcttttgaagacagcgagtgctcctttgaaatcgaggtggtcattttacccaatgat
tatttccgattaatcaaaattaagataattgtcaaagacaccaatgacaacgcccccatg
ttcccctctcctgtgatcaacatttcaattccagaaaacacactcatcaacagccgcttt
gctattccttctgccaccgatccagataccggacccaacagcgtacacaaatacgagctg
ttgaacggacagagtgccttcggtttggatatcgtggagacaccagagggagagaaatgg
cctcagcttatcgttcagcagaatttagacagagagcagaaagacacttatgtgatgaaa
gtaaaagtggaggatggggggaacccacagaaatccagcactgccattctacaggtgacc
gtcaccgatgttaacgataaccggcccgtctttaaagagagccaaattgaggtccacatc
ccggaaaactctcccgtcgggacatctgtagttcagctgcaagccaccgatgcagatgtg
ggggccaatgcagaaataaaatacatgtttggtacccaggtgtctccagcgacacggaga
ctatttgctctgaactccaccactgggctcataacagttcagaggccgcttgatagagag
gagactgccattcataaactcacagtactagccagcgatggaagctcaagtccggctaga
gccaccataactatcaacgtgaccgatgttaacgacaacgctccaaacatcgacctgaga
tacatcatcagtccaattaatggtactgtaatgctctctgaaaaagatccaataaacact
aagattgccctcataaccgtatccgacaaagacacagatgtcaacggcaaggtgatttgc
ttcattgacaaagacgttccttttcacctcaaagcggtttatgataaccagtttctgtta
gaaacatctgcactgctcgattatgaaggaaccaaggagtacatcttcaagattgtggca
tctgactcgggaaaacctagtttgaaccagactgccctggttagagtacggctggaggac
gagaacgacaatccgcccatttttacccagcccgtcatcgagctggcagtcatggagaac
aaccagcgtgacatgttcctgacgaccatcagcgccactgatgaggatagcggacggaat
gcagagattgtctaccagctcggacccaacgcatcgttctttgatcttgaccgcaaaact
ggagtgctaacggcatccagggtgtttgatagggaggagcaagagcggttcctcttcacg
gtcactgctagagacaatggcaccagggctctgcagagtcaagctgcggtcattgtgacc
atcctggacgagaatgacaacagccctaaatttacacacaaccactttcaattcttcgtg
tcagagaacctgcctaaatatagtacagttggagtgatcacggtcacagatgcagatgct
ggtgagaatgcagtggtgagactctcaatcctcaacgataatgagaacttcatccttgac
ccagattctggagtcataaagtccaatgtctcctttgaccgagagcagcaaagctcctac
acctttgacgtcagagccgtggacaatggaagccctccgtgttcatcggctgccaaggtg
accatcaatgtcattgatgtcaatgacaacaccccgatcgtcatttacccaccatcaaac
acctctttcaaactagtgccagtgtccgcgattccagggtcggttgtggccgaggtgttt
gcagtagatggtgacacaggtatgaatgcagaactcaagtacactattgttagttgcaaa
agagagggtcttttcagaattgaccccgtgacgggaaacatcacgttagagcagaaaccc
tcccctgtagactttggcctccacaggctagtggtcaacatcagtgatctcggctatcca
aagtccctgcacaccctcgtgctcgttttcctgtacgtgaacgacacagttggaaattcc
tcgtacatacatgacctcatccgacggaaaatggaaactccgctggatagaaacattggt
gagagcagagagacttatcagaatgttgacaacctgaagaccattatcgccatcgtgacg
ggcgctatggtagtgattgtggtcatcttcataacggttctggtgcgctgccggcacgcc
tcacagttcaaggccgctcagagaaagaagcagggtgctgagtggatgtcccccaaccag
gagaacaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagctccctc
ttgaactttgtcaccatcgaggaaaacaaacccgacgaccctgcccacgaacccataaac
ggaaccatcagtctcccggctgagctcgaggagcccgggattggacgctttgattggaac
tccacccctaccaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcttcgccccagtcggccttccacctcaaagccgacactccggtgtctgtgaaaaagcat
cacgtcatacaggagctgccgctggacaatacctttgtggggggctgtgacacactttcc
aaacgttcctccaccagctctgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacagggaacgctcacccgcgcccgcacc
gaactgaaccccgactatctggacctacgctcccgagccgagctgaacccagagtactgg
acgccctgcacccctctatctcagcggcgcgtcacgtttcacctgccggacgggtctcag
gaaagctgcagtgacagtgggctgggggaccatgagcccgtgggcagtgtcccgctcctc
tcacaccctctccctctggtgcaggcgcaggacgacttctacgagcagacctctccggac
aagaggaccgaagcagacgggaactcggaccccaactctgatggacctctaggcccgaga
ggcttggtggaggccacagagatgtgcacccaagagtgtctggtgttgggccactccgac
aactgctggatgcctccgagcctgagctcgtacccttcgcccaagtcccccgtttcctct
ttcaacaaccaaaaggagtgggctaaagagagactgctcaacggccacacactgacccgc
agctggaaaggtgagcgtggaagccaggagcagtttggggacaggaagacctacgggagc
tcggaaggacattttggcagcggcggtcacatggccgacatcccgttggctagcctgaaa
tcttaccagcccgcctccggccacgacagtcctaaagaacagcagctttaa
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